Propagation of CopR regulog to Lactobacillus brevis ATCC 367
| Source regulog: | CopR - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CopY |
| Regulation mode: | repressor |
| Biological process: | Copper homeostasis |
| Effector: | Copper ion, (Cu2+) |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Lactobacillus brevis ATCC 367 |
| Orthologous TF(s) | LVIS_0270 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -68
Score: 5.4 Sequence: ATGACTACAGATGTAGACTC
Position: -35
Score: 6 Sequence: AAGATTACATTTGTAGTCTA
Locus tag: LVIS_0270
|
||||
| LVIS_0270 | -68 | 5.4 | ATGACTACAGATGTAGACTC | |
| -35 | 6 | AAGATTACATTTGTAGTCTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: copR | ||||
| Ortholog function: Copper transport transcriptional regulator CopR, CopY family | ||||
| Lactobacillus brevis ATCC 367 | LVIS_0270 | -68 | 5.4 | ATGACTACAGATGTAGACTC |
| -35 | 6 | AAGATTACATTTGTAGTCTA | ||
| Lactobacillus casei ATCC 334 | LSEI_1745 | -59 | 5 | TGGTTTACAGTTGTAAATTA |
| -29 | 6.1 | TAGATTACAGATGTAAACGG | ||
| Lactobacillus plantarum WCFS1 | lp_3365 | -52 | 5.2 | ACGTTTACGGTTGTAAACTA |
| Lactobacillus rhamnosus GG | LGG_01802 | -59 | 5 | TCGTTTACAGTTGTAAATTA |
| -29 | 6.2 | AAGATTACAAGTGTAAACGG | ||
| Pediococcus pentosaceus ATCC 25745 | PEPE_1646 | -61 | 6.1 | AAGTTTACAAATGTAGTCTA |
| -35 | 5.9 | AAGATTACATTTGTAAACAG | ||
|
Position: -139
Score: 5.7 Sequence: AGGATTACATTTGTAAACAA
Locus tag: LVIS_0274
|
||||
| LVIS_0274 | -139 | 5.7 | AGGATTACATTTGTAAACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: copA2 | ||||
| Ortholog function: Copper-exporting ATPase (EC 3.6.3.4) | ||||
| Lactobacillus brevis ATCC 367 | LVIS_0274 | -184 | 5.1 | TCGTTGACAGATGTAAACGA |
| -139 | 5.7 | AGGATTACATTTGTAAACAA | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_1706 | -35 | 5.4 | GTGATTACAAATGTAAATTA |