Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CopR regulog to Lactobacillus brevis ATCC 367

Reference regulog properties
Source regulog: CopR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: CopY
Regulation mode: repressor
Biological process: Copper homeostasis
Effector: Copper ion, (Cu2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus brevis ATCC 367
Orthologous TF(s) LVIS_0270
Regulated genes 2
Built upon 34 sites [see more]
Predicted regulatory interactions in Lactobacillus brevis ATCC 367
Locus tag Position Score Sequence
Position: -68
Score: 5.4
Sequence: ATGACTACAGATGTAGACTC
Position: -35
Score: 6
Sequence: AAGATTACATTTGTAGTCTA
Locus tag: LVIS_0270
LVIS_0270 -68 5.4 ATGACTACAGATGTAGACTC
-35 6 AAGATTACATTTGTAGTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: copR
Ortholog function: Copper transport transcriptional regulator CopR, CopY family
Lactobacillus brevis ATCC 367 LVIS_0270 -68 5.4 ATGACTACAGATGTAGACTC
-35 6 AAGATTACATTTGTAGTCTA
Lactobacillus casei ATCC 334 LSEI_1745 -59 5 TGGTTTACAGTTGTAAATTA
-29 6.1 TAGATTACAGATGTAAACGG
Lactobacillus plantarum WCFS1 lp_3365 -52 5.2 ACGTTTACGGTTGTAAACTA
Lactobacillus rhamnosus GG LGG_01802 -59 5 TCGTTTACAGTTGTAAATTA
-29 6.2 AAGATTACAAGTGTAAACGG
Pediococcus pentosaceus ATCC 25745 PEPE_1646 -61 6.1 AAGTTTACAAATGTAGTCTA
-35 5.9 AAGATTACATTTGTAAACAG
Position: -139
Score: 5.7
Sequence: AGGATTACATTTGTAAACAA
Locus tag: LVIS_0274
LVIS_0274 -139 5.7 AGGATTACATTTGTAAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: copA2
Ortholog function: Copper-exporting ATPase (EC 3.6.3.4)
Lactobacillus brevis ATCC 367 LVIS_0274 -184 5.1 TCGTTGACAGATGTAAACGA
-139 5.7 AGGATTACATTTGTAAACAA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1706 -35 5.4 GTGATTACAAATGTAAATTA
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