Profile of regulator CopR in Lactobacillaceae
Properties
| Regulator family: |
CopY |
| Regulation mode: |
repressor |
| Biological process: |
Copper homeostasis |
| Effector: |
Copper ion, (Cu2+) |
| Regulog: |
CopR - Lactobacillaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Lactobacillus acidophilus NCFM
|
|
LBA1963 |
copR |
-32 |
6.1 |
ATAGTTACATTTGTAAACGA |
|
Lactobacillus brevis ATCC 367
|
|
LVIS_0270 |
copR |
-68 |
5.4 |
ATGACTACAGATGTAGACTC |
|
LVIS_0270 |
copR |
-35 |
6 |
AAGATTACATTTGTAGTCTA |
|
LVIS_0274 |
copA2 |
-139 |
5.7 |
AGGATTACATTTGTAAACAA |
|
LVIS_0274 |
copA2 |
-184 |
5.1 |
TCGTTGACAGATGTAAACGA |
|
Lactobacillus casei ATCC 334
|
|
LSEI_A02 |
copR |
-46 |
4.6 |
GAGACTACAAACGTAAACTT |
|
LSEI_1745 |
copR |
-29 |
6.1 |
TAGATTACAGATGTAAACGG |
|
LSEI_1745 |
copR |
-59 |
5 |
TGGTTTACAGTTGTAAATTA |
|
LSEI_A02 |
copR |
-77 |
5.4 |
GTGACTACAGTTGTAAACTA |
|
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
|
|
LBUL_0587 |
copR |
-31 |
6 |
AAGGTTATAGATGTAAACGA |
|
LBUL_0587 |
copR |
-72 |
4.8 |
TTGTCGACAAATGTAAACCA |
|
Lactobacillus fermentum IFO 3956
|
|
LAF_0138 |
copA2 |
-80 |
4.9 |
TCGTTGACAATTGTAAACGG |
|
LAF_1037 |
copR |
-42 |
4.6 |
ACGGGTACACTTGTAAACTG |
|
LAF_0138 |
copA2 |
-35 |
5.7 |
AGATTTACAGTTGTAAACGA |
|
Lactobacillus helveticus DPC 4571
|
|
lhv_1944 |
copB |
-177 |
5.4 |
GTGACTACAGTTGTAAACTA |
|
lhv_2094 |
copR |
-32 |
6.3 |
ATATTTACAAATGTAAACTA |
|
lhv_1944 |
copB |
-146 |
5.1 |
GAGACTACAAATGTAAACTT |
|
lhv_2094 |
copR |
-59 |
5.3 |
AAGTTTACAAATGTAAAATT |
|
Lactobacillus johnsonii NCC 533
|
|
LJ1835 |
copR |
-61 |
5.4 |
TTGTTGACAAGTGTAAACTA |
|
LJ1835 |
copR |
-33 |
6.3 |
ATGATTACATTTGTAAACGA |
|
Lactobacillus plantarum WCFS1
|
|
lp_3363 |
copB |
-43 |
5.9 |
TAAATTACAGATGTAGACAA |
|
lp_3363 |
copB |
-69 |
4.7 |
TCGTCTACAATTGTAAACTT |
|
lp_3365 |
copR |
-52 |
5.2 |
ACGTTTACGGTTGTAAACTA |
|
Lactobacillus reuteri JCM 1112
|
|
LAR_0894 |
copR |
-32 |
5.1 |
GAATTTACATGTGTAAACGC |
|
LAR_0423 |
copA2 |
-70 |
4.6 |
TTGTTGACAACTGTAAACTT |
|
LAR_0423 |
copA2 |
-27 |
6.4 |
ATGATTACAATTGTAAACTA |
|
Lactobacillus rhamnosus GG
|
|
LGG_01802 |
copR |
-29 |
6.2 |
AAGATTACAAGTGTAAACGG |
|
LGG_01802 |
copR |
-59 |
5 |
TCGTTTACAGTTGTAAATTA |
|
Lactobacillus sakei subsp. sakei 23K
|
|
LSA1461 |
copR |
-35 |
6.4 |
ATAATTACAAATGTAAACGA |
|
Lactobacillus salivarius subsp. salivarius UCC118
|
|
LSL_1706 |
copA2 |
-35 |
5.4 |
GTGATTACAAATGTAAATTA |
|
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
|
|
LEUM_0049 |
copR |
-25 |
5.9 |
TAGTTTACAGTTGTAGACTA |
|
Oenococcus oeni PSU-1
|
|
OEOE_1648 |
copR |
-30 |
5.8 |
AAGTCTACAAGTGTAGACTA |
|
Pediococcus pentosaceus ATCC 25745
|
|
PEPE_1646 |
copR |
-35 |
5.9 |
AAGATTACATTTGTAAACAG |
|
PEPE_1646 |
copR |
-61 |
6.1 |
AAGTTTACAAATGTAGTCTA |
Export
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Regulatory Sites
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