Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NagR regulog to Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Reference regulog properties
Source regulog: NagR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: N-acetylglucosamine utilization
Effector: N-acetylglucosamine-6-phosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Orthologous TF(s) LEUM_0426
Regulated genes 2
Built upon 49 sites [see more]
Predicted regulatory interactions in Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Locus tag Position Score Sequence
Position: -50
Score: 5.1
Sequence: ATATTGGTATAGACCAAAAC
Position: -35
Score: 5.8
Sequence: AAAACGGTATAGACCAATTT
Locus tag: LEUM_0354
LEUM_0354 -50 5.1 ATATTGGTATAGACCAAAAC
-35 5.8 AAAACGGTATAGACCAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nagB
Ortholog function: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Lactobacillus acidophilus NCFM LBA1948 -57 5.7 AAAATGGTCTATTCCATTTT
-37 5 ATAATGGACTAGACCATTAA
Lactobacillus casei ATCC 334 LSEI_2889 -77 4.5 ATTACGGTATAGACCACTAT
-34 4.7 ACATTGGACTAGACCAGATA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_2010 -53 5.6 AAAATGGACTATACCAATAT
Lactobacillus helveticus DPC 4571 lhv_2077 -54 5.7 AAAATGGTCTATTCCATTTT
-34 4.6 ATAATGGACTAGACCAGTAA
Lactobacillus rhamnosus GG LGG_02913 -78 5.2 AATTAGGTATAGACCATTGT
-35 4.9 ATATTGGACTAGACCAGATA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1465 -92 5.1 TAAATGGTATAGACCATGAA
-39 5.4 TAATTGGTATAGACCAAAAC
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0354 -50 5.1 ATATTGGTATAGACCAAAAC
-35 5.8 AAAACGGTATAGACCAATTT
Pediococcus pentosaceus ATCC 25745 PEPE_0335 -60 5.1 ATTTTGGTTTAGACCATTTT
-39 5.5 TAATTGGACTATACCAAAAA
Position: -82
Score: 5.9
Sequence: TAATAGGTCTAGACCAATTA
Locus tag: LEUM_0425
LEUM_0425 -82 5.9 TAATAGGTCTAGACCAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nagA
Ortholog function: N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25)
Lactobacillus brevis ATCC 367 LVIS_0539 -66 4.8 TTTCTGGTCTATACCGATTA
Lactobacillus casei ATCC 334 LSEI_1808 -73 4.8 ATCTTGGTCTATACCAGTTA
Lactobacillus plantarum WCFS1 lp_0562 -55 5.2 AGTTTGGTCTATACCGATTA
Lactobacillus sakei subsp. sakei 23K LSA1588 -56 5.6 TTTTTGGTCTATACCATTTA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1466 -146 5.4 GTTTTGGTCTATACCAATTA
-93 5.1 TTCATGGTCTATACCATTTA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0425 -82 5.9 TAATAGGTCTAGACCAATTA
Pediococcus pentosaceus ATCC 25745 PEPE_1528 -57 5.1 TTTTTGGTCTATACCGATAT