Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of CopR regulog to Lactobacillus reuteri JCM 1112

Reference regulog properties
Source regulog: CopR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: CopY
Regulation mode: repressor
Biological process: Copper homeostasis
Effector: Copper ion, (Cu2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus reuteri JCM 1112
Orthologous TF(s) LAR_0894
Regulated genes 2
Built upon 34 sites [see more]
Predicted regulatory interactions in Lactobacillus reuteri JCM 1112
Locus tag Position Score Sequence
Position: -27
Score: 6.4
Sequence: ATGATTACAATTGTAAACTA
Locus tag: LAR_0423
LAR_0423 -27 6.4 ATGATTACAATTGTAAACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: copA2
Ortholog function: Copper-exporting ATPase (EC 3.6.3.4)
Lactobacillus acidophilus NCFM LBA1964 -32 6.1 ATAGTTACATTTGTAAACGA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_0588 -72 4.8 TTGTCGACAAATGTAAACCA
-31 6 AAGGTTATAGATGTAAACGA
Lactobacillus fermentum IFO 3956 LAF_0138 -80 4.9 TCGTTGACAATTGTAAACGG
-35 5.7 AGATTTACAGTTGTAAACGA
Lactobacillus helveticus DPC 4571 lhv_2095 -59 5.3 AAGTTTACAAATGTAAAATT
-32 6.3 ATATTTACAAATGTAAACTA
Lactobacillus johnsonii NCC 533 LJ1836 -61 5.4 TTGTTGACAAGTGTAAACTA
-33 6.3 ATGATTACATTTGTAAACGA
Lactobacillus reuteri JCM 1112 LAR_0423 -70 4.6 TTGTTGACAACTGTAAACTT
-27 6.4 ATGATTACAATTGTAAACTA
Position: -32
Score: 5.1
Sequence: GAATTTACATGTGTAAACGC
Locus tag: LAR_0894
LAR_0894 -32 5.1 GAATTTACATGTGTAAACGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: copR
Ortholog function: Copper transport transcriptional regulator CopR, CopY family
Lactobacillus fermentum IFO 3956 LAF_1037 -42 4.6 ACGGGTACACTTGTAAACTG
Lactobacillus reuteri JCM 1112 LAR_0894 -32 5.1 GAATTTACATGTGTAAACGC
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