Propagation of CopR regulog to Lactobacillus reuteri JCM 1112
| Source regulog: | CopR - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CopY |
| Regulation mode: | repressor |
| Biological process: | Copper homeostasis |
| Effector: | Copper ion, (Cu2+) |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Lactobacillus reuteri JCM 1112 |
| Orthologous TF(s) | LAR_0894 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -27
Score: 6.4 Sequence: ATGATTACAATTGTAAACTA
Locus tag: LAR_0423
|
||||
| LAR_0423 | -27 | 6.4 | ATGATTACAATTGTAAACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: copA2 | ||||
| Ortholog function: Copper-exporting ATPase (EC 3.6.3.4) | ||||
| Lactobacillus acidophilus NCFM | LBA1964 | -32 | 6.1 | ATAGTTACATTTGTAAACGA |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | LBUL_0588 | -72 | 4.8 | TTGTCGACAAATGTAAACCA |
| -31 | 6 | AAGGTTATAGATGTAAACGA | ||
| Lactobacillus fermentum IFO 3956 | LAF_0138 | -80 | 4.9 | TCGTTGACAATTGTAAACGG |
| -35 | 5.7 | AGATTTACAGTTGTAAACGA | ||
| Lactobacillus helveticus DPC 4571 | lhv_2095 | -59 | 5.3 | AAGTTTACAAATGTAAAATT |
| -32 | 6.3 | ATATTTACAAATGTAAACTA | ||
| Lactobacillus johnsonii NCC 533 | LJ1836 | -61 | 5.4 | TTGTTGACAAGTGTAAACTA |
| -33 | 6.3 | ATGATTACATTTGTAAACGA | ||
| Lactobacillus reuteri JCM 1112 | LAR_0423 | -70 | 4.6 | TTGTTGACAACTGTAAACTT |
| -27 | 6.4 | ATGATTACAATTGTAAACTA | ||
|
Position: -32
Score: 5.1 Sequence: GAATTTACATGTGTAAACGC
Locus tag: LAR_0894
|
||||
| LAR_0894 | -32 | 5.1 | GAATTTACATGTGTAAACGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: copR | ||||
| Ortholog function: Copper transport transcriptional regulator CopR, CopY family | ||||
| Lactobacillus fermentum IFO 3956 | LAF_1037 | -42 | 4.6 | ACGGGTACACTTGTAAACTG |
| Lactobacillus reuteri JCM 1112 | LAR_0894 | -32 | 5.1 | GAATTTACATGTGTAAACGC |