Propagation of Rex regulog to Lactobacillus acidophilus NCFM
| Source regulog: | Rex - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Lactobacillus acidophilus NCFM |
| Orthologous TF(s) | LBA0398 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -40
Score: 5.4 Sequence: TTGTTAAAATTATCACTA
Locus tag: LBA0271
|
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| LBA0271 | -40 | 5.4 | TTGTTAAAATTATCACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ldh | ||||
| Ortholog function: L-lactate dehydrogenase (EC 1.1.1.27) | ||||
| Lactobacillus acidophilus NCFM | LBA0271 | -40 | 5.4 | TTGTTAAAATTATCACTA |
| Lactobacillus helveticus DPC 4571 | lhv_0289 | -39 | 5.4 | TTGTTAAAATTATCACTA |
| Lactobacillus johnsonii NCC 533 | LJ0274 | -40 | 5.4 | TTGTTAAATAAATCACTA |
| Lactobacillus sakei subsp. sakei 23K | LSA1606 | -97 | 4.9 | TTCTGAAAATTTAAACAA |
|
Position: -45
Score: 5.5 Sequence: TTGTAAATTAGTTCACAA
Locus tag: LBA0461
|
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| LBA0461 | -45 | 5.5 | TTGTAAATTAGTTCACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: adhE | ||||
| Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10) | ||||
| Lactobacillus acidophilus NCFM | LBA0461 | -45 | 5.5 | TTGTAAATTAGTTCACAA |
| Lactobacillus brevis ATCC 367 | LVIS_0119 | -105 | 5 | TTGTGATTTTTTTAACAT |
| -47 | 4.8 | TCGTGAAGAAGTTAACAA | ||
| Lactobacillus casei ATCC 334 | LSEI_0775 | -106 | 5 | TCGTGAAAAAATTCACCA |
| -85 | 4.7 | TTGTTTACAAAATCACAA | ||
| -49 | 5.4 | TTGTGAAATGGTTAACAA | ||
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | LBUL_1581 | -47 | 5.2 | TTGAGAAATTGATCACAA |
| Lactobacillus fermentum IFO 3956 | LAF_0277 | -151 | 4.9 | TTGAAATTTAATTCACAA |
| -85 | 4.5 | TTGTTGACTAAATCACAA | ||
| Lactobacillus johnsonii NCC 533 | LJ1766 | -289 | 4.8 | TTATTAAAATTTTAACAT |
| -191 | 5.3 | TTGTGAAATATTTTTCAA | ||
| -104 | 5 | TTGTAAAAAGATGCACAA | ||
| Lactobacillus plantarum WCFS1 | lp_3662 | -43 | 5.5 | TTGTAAATTAATTCACAA |
| Lactobacillus reuteri JCM 1112 | LAR_0310 | -238 | 4.4 | TTGTGAAATAGACTTCAA |
| -104 | 5.1 | TTGTTTAAATGTTCACAA | ||
| Lactobacillus rhamnosus GG | LGG_00757 | -105 | 5.2 | TCGTGAAAAAGTTCACTA |
| -84 | 4.7 | TTGTTTACAAAATCACAA | ||
| -48 | 5.4 | TTGTGAAATGGTTAACAA | ||
| Lactobacillus sakei subsp. sakei 23K | LSA0379 | -99 | 5.1 | CTGTTAAAAAAATCACAA |
| -42 | 5.2 | TTGTTAATTAAATCACAT | ||
|
Position: -41
Score: 5.4 Sequence: TTGTGAAATATATAACTA
Locus tag: LBA0463
|
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| LBA0463 | -41 | 5.4 | TTGTGAAATATATAACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ackA | ||||
| Ortholog function: Acetate kinase (EC 2.7.2.1) | ||||
| Lactobacillus acidophilus NCFM | LBA0463 | -41 | 5.4 | TTGTGAAATATATAACTA |
| Lactobacillus helveticus DPC 4571 | lhv_0497 | -38 | 5.5 | TTGTGAAAAATATAACTA |