Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LexA regulog to Lactobacillus reuteri 100-23

Reference regulog properties
Source regulog: LexA - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus reuteri 100-23
Orthologous TF(s) Lreu23DRAFT_0968
Regulated genes 4
Built upon 99 sites [see more]
Predicted regulatory interactions in Lactobacillus reuteri 100-23
Locus tag Position Score Sequence
Position: -75
Score: 4.4
Sequence: ACGAATACATGTTTGG
Locus tag: Lreu23DRAFT_1232
Lreu23DRAFT_1232 -75 4.4 ACGAATACATGTTTGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: uvrB
Ortholog function: Excinuclease ABC, subunit B
Lactobacillus acidophilus NCFM LBA0688 -87 4.6 GCGAAAACACGTTCGT
Lactobacillus brevis ATCC 367 LVIS_0648 -101 4.9 GCGAAAGTATGTTCGG
Lactobacillus casei ATCC 334 LSEI_0956 -206 5 GCGAAAGTATGTTCGC
-127 4.2 ACGAAATTTTGTTTGG
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_0549 -64 4.1 TAGAATCTATGTTCGG
Lactobacillus fermentum IFO 3956 LAF_0353 -99 4.7 ACGAATAAACGTTCGT
Lactobacillus helveticus DPC 4571 lhv_0729 -86 4.6 GCGAAAACACGTTCGT
Lactobacillus johnsonii NCC 533 LJ0863 -86 5 GCGAAAATACGTTCGC
Lactobacillus plantarum WCFS1 lp_0772 -146 5 GCGAAAGTATGTTCGA
Lactobacillus reuteri JCM 1112 LAR_0372 -132 4.4 ACGAATACATGTTTGG
Lactobacillus rhamnosus GG LGG_00923 -271 5 GCGAAAGTATGTTCGC
Lactobacillus sakei subsp. sakei 23K LSA0523 -190 4.9 GCGAAAATACGTTCGG
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0392 -89 4.9 TAGAACGTTTGTTCGT
Oenococcus oeni PSU-1 OEOE_0372 -50 4.2 GGGAACTAATGTTCGC
Pediococcus pentosaceus ATCC 25745 PEPE_0448 -127 4.9 GCGAAAGTATGTTCGG
Position: -59
Score: 4.8
Sequence: TTGAACATATGTTTGT
Locus tag: Lreu23DRAFT_1438
Lreu23DRAFT_1438 -59 4.8 TTGAACATATGTTTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: umuC
Ortholog function: UV-damage repair protein
Lactobacillus fermentum IFO 3956 LAF_1605 -67 3.9 CCGAACACTTGTTCCG
Lactobacillus plantarum WCFS1 lp_3023 -192 4.9 AAGAACATATGTTCTT
Lactobacillus reuteri JCM 1112 LAR_1238 -59 4.8 TTGAACATATGTTTGA
Position: -249
Score: 4.6
Sequence: GAAAACATTTGTTTTC
Position: -67
Score: 4.8
Sequence: AAGAATATATGTTCGT
Locus tag: Lreu23DRAFT_1134
Lreu23DRAFT_1134 -249 4.6 GAAAACATTTGTTTTC
-67 4.8 AAGAATATATGTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: addB
Ortholog function: ATP-dependent nuclease, subunit B
Lactobacillus acidophilus NCFM LBA1166 -8 4.1 GCGAACAAATGATCAA
Lactobacillus brevis ATCC 367 LVIS_2268 -202 4.4 TTGAACGTGTGTTCGT
Lactobacillus fermentum IFO 3956 LAF_0036 -75 4.1 GCGAACATTCATTCCC
Lactobacillus helveticus DPC 4571 lhv_1274 -8 4.1 GCGAACAAATGATCAA
Lactobacillus plantarum WCFS1 lp_2694 -32 4.3 GAGAACGTTTGTTCAG
Lactobacillus reuteri JCM 1112 LAR_0047 -67 4.8 AAGAATATATGTTCGT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1482 -62 4.3 ACGAACAATCGTGCGC