Propagation of LexA regulog to Lactobacillus reuteri 100-23
| Source regulog: | LexA - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Lactobacillus reuteri 100-23 |
| Orthologous TF(s) | Lreu23DRAFT_0968 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -75
Score: 4.4 Sequence: ACGAATACATGTTTGG
Locus tag: Lreu23DRAFT_1232
|
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| Lreu23DRAFT_1232 | -75 | 4.4 | ACGAATACATGTTTGG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uvrB | ||||
| Ortholog function: Excinuclease ABC, subunit B | ||||
| Lactobacillus acidophilus NCFM | LBA0688 | -87 | 4.6 | GCGAAAACACGTTCGT |
| Lactobacillus brevis ATCC 367 | LVIS_0648 | -101 | 4.9 | GCGAAAGTATGTTCGG |
| Lactobacillus casei ATCC 334 | LSEI_0956 | -206 | 5 | GCGAAAGTATGTTCGC |
| -127 | 4.2 | ACGAAATTTTGTTTGG | ||
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | LBUL_0549 | -64 | 4.1 | TAGAATCTATGTTCGG |
| Lactobacillus fermentum IFO 3956 | LAF_0353 | -99 | 4.7 | ACGAATAAACGTTCGT |
| Lactobacillus helveticus DPC 4571 | lhv_0729 | -86 | 4.6 | GCGAAAACACGTTCGT |
| Lactobacillus johnsonii NCC 533 | LJ0863 | -86 | 5 | GCGAAAATACGTTCGC |
| Lactobacillus plantarum WCFS1 | lp_0772 | -146 | 5 | GCGAAAGTATGTTCGA |
| Lactobacillus reuteri JCM 1112 | LAR_0372 | -132 | 4.4 | ACGAATACATGTTTGG |
| Lactobacillus rhamnosus GG | LGG_00923 | -271 | 5 | GCGAAAGTATGTTCGC |
| Lactobacillus sakei subsp. sakei 23K | LSA0523 | -190 | 4.9 | GCGAAAATACGTTCGG |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0392 | -89 | 4.9 | TAGAACGTTTGTTCGT |
| Oenococcus oeni PSU-1 | OEOE_0372 | -50 | 4.2 | GGGAACTAATGTTCGC |
| Pediococcus pentosaceus ATCC 25745 | PEPE_0448 | -127 | 4.9 | GCGAAAGTATGTTCGG |
|
Position: -59
Score: 4.8 Sequence: TTGAACATATGTTTGT
Locus tag: Lreu23DRAFT_1438
|
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| Lreu23DRAFT_1438 | -59 | 4.8 | TTGAACATATGTTTGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: umuC | ||||
| Ortholog function: UV-damage repair protein | ||||
| Lactobacillus fermentum IFO 3956 | LAF_1605 | -67 | 3.9 | CCGAACACTTGTTCCG |
| Lactobacillus plantarum WCFS1 | lp_3023 | -192 | 4.9 | AAGAACATATGTTCTT |
| Lactobacillus reuteri JCM 1112 | LAR_1238 | -59 | 4.8 | TTGAACATATGTTTGA |
|
Position: -249
Score: 4.6 Sequence: GAAAACATTTGTTTTC
Position: -67
Score: 4.8 Sequence: AAGAATATATGTTCGT
Locus tag: Lreu23DRAFT_1134
|
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| Lreu23DRAFT_1134 | -249 | 4.6 | GAAAACATTTGTTTTC | |
| -67 | 4.8 | AAGAATATATGTTCGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: addB | ||||
| Ortholog function: ATP-dependent nuclease, subunit B | ||||
| Lactobacillus acidophilus NCFM | LBA1166 | -8 | 4.1 | GCGAACAAATGATCAA |
| Lactobacillus brevis ATCC 367 | LVIS_2268 | -202 | 4.4 | TTGAACGTGTGTTCGT |
| Lactobacillus fermentum IFO 3956 | LAF_0036 | -75 | 4.1 | GCGAACATTCATTCCC |
| Lactobacillus helveticus DPC 4571 | lhv_1274 | -8 | 4.1 | GCGAACAAATGATCAA |
| Lactobacillus plantarum WCFS1 | lp_2694 | -32 | 4.3 | GAGAACGTTTGTTCAG |
| Lactobacillus reuteri JCM 1112 | LAR_0047 | -67 | 4.8 | AAGAATATATGTTCGT |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_1482 | -62 | 4.3 | ACGAACAATCGTGCGC |