Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of PerR regulog to Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293

Reference regulog properties
Source regulog: PerR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Manganese homeostasis; Oxidative stress response; Iron homeostasis
Effector: Iron ion, (Fe2+); Manganese ion, (Mn2+); Hydrogen peroxide
Phylum: Firmicutes
Propagated regulon:
Target genome Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Orthologous TF(s) LEUM_0802
Regulated genes 4
Built upon 49 sites [see more]
Predicted regulatory interactions in Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Locus tag Position Score Sequence
Position: -60
Score: 5.1
Sequence: TTAGAATTGTTCTAG
Locus tag: LEUM_0104
LEUM_0104 -60 5.1 TTAGAATTGTTCTAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: npr
Ortholog function: NADH peroxidase (EC 1.11.1.1)
Lactobacillus brevis ATCC 367 LVIS_B09 -90 5.9 TTAGAATGATTCTAA
Lactobacillus casei ATCC 334 LSEI_0397 -74 4.7 TTGGAACTATTCTAA
Lactobacillus plantarum WCFS1 lp_2544 -95 5.1 TTAGAATAATTACAA
Lactobacillus rhamnosus GG LGG_00491 -75 5.5 TTGTAATTATTCTAA
Lactobacillus sakei subsp. sakei 23K LSA0575 -61 5 TTGTAATAATTATTA
Position: -30
Score: 5.5
Sequence: TTAGAATAGTTCTAA
Locus tag: LEUM_0493
LEUM_0493 -30 5.5 TTAGAATAGTTCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pcl2
Ortholog function: Predicted membrane protein
Lactobacillus brevis ATCC 367 LVIS_1881 -98 5.6 TAAGAATTATTCTAA
Lactobacillus fermentum IFO 3956 LAF_1546 -103 5.3 TTAGAATTCTTCTAA
-39 5.7 TTATAATGGTTCTAA
Lactobacillus plantarum WCFS1 lp_3360 -37 5.6 TAATAATGATTATAA
Lactobacillus reuteri JCM 1112 LAR_1418 -102 5.4 TTTTAATGATTCTAA
-38 6 TTATAATGATTCTAA
Lactobacillus sakei subsp. sakei 23K LSA1194 -43 5.6 TTATAATGGTTATAA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0409 -38 5.5 TTATAATTTTTCTAA
Pediococcus pentosaceus ATCC 25745 PEPE_0043 -37 5.7 TTAAAATGATTCTAA
Position: -36
Score: 5.1
Sequence: TTAGAATGAATATAA
Locus tag: LEUM_0546
LEUM_0546 -36 5.1 TTAGAATGAATATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ycnB
Ortholog function: Predicted permease
Lactobacillus brevis ATCC 367 LVIS_1917 -39 5.2 TAAGAATATTTCTAA
Lactobacillus casei ATCC 334 LSEI_2416 -192 5.3 TTAGATTAATTCTAA
Lactobacillus fermentum IFO 3956 LAF_1361 -109 5.3 TTATAATCATTTTAA
-30 4.8 TTATAAGTTTTCTAA
Lactobacillus reuteri JCM 1112 LAR_1231 -107 5.4 TTAAAATAATTATAA
-31 5.6 TAATAATTATTCTAA
Lactobacillus rhamnosus GG LGG_02414 -72 4.8 TTAGATTAATTCCAA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1578 -64 4.6 TTACAAAAATTCTAA
Pediococcus pentosaceus ATCC 25745 PEPE_0503 -73 5.3 TTAGATTAATTCTAA
Position: -84
Score: 4.9
Sequence: TTAAAATGATTCTTG
Position: -33
Score: 5.6
Sequence: TTAGAATTGTTCTAA
Locus tag: LEUM_1450
LEUM_1450 -84 4.9 TTAAAATGATTCTTG
-33 5.6 TTAGAATTGTTCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ahpC
Ortholog function: Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
Lactobacillus brevis ATCC 367 LVIS_0086 -82 4.9 TTAGAATCATTCTTG
Lactobacillus casei ATCC 334 LSEI_2506 -31 5.5 TAATAATCATTCTAA
Lactobacillus fermentum IFO 3956 LAF_0409 -32 5 TGATAATCGTTCTAA
Lactobacillus reuteri JCM 1112 LAR_1019 -94 5.6 TTAGAATTGTTCTAA
-33 5.7 TAAGAATGATTCTAA
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