Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of ArgR regulog to Lactobacillus reuteri 100-23

Reference regulog properties
Source regulog: ArgR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: ArgR
Regulation mode: repressor, activator
Biological process: Arginine degradation; Arginine biosynthesis
Effector: Arginine
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus reuteri 100-23
Orthologous TF(s) Lreu23DRAFT_1308
Regulated genes 3
Built upon 27 sites [see more]
Predicted regulatory interactions in Lactobacillus reuteri 100-23
Locus tag Position Score Sequence
Position: 11
Score: 3.5
Sequence: AATGATTGAAATTAAAAA
Position: 13
Score: 2.9
Sequence: TGATTGAAATTAAAAATT
Position: 19
Score: 3.8
Sequence: AAATTAAAAATTTGCAGA
Position: 30
Score: 3
Sequence: TTGCAGAAAAAATTCAAA
Locus tag: Lreu23DRAFT_0778
Lreu23DRAFT_0778 11 3.5 AATGATTGAAATTAAAAA
13 2.9 TGATTGAAATTAAAAATT
19 3.8 AAATTAAAAATTTGCAGA
30 3 TTGCAGAAAAAATTCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: artM
Ortholog function: Arginine ABC transporter, ATP-binding protein
Lactobacillus brevis ATCC 367 LVIS_1201 -161 4.6 AATGTATAAATTTTTATA
-96 4.9 AGTGTATAAAAATAGATA
Lactobacillus casei ATCC 334 LSEI_1345 -56 4.2 ATTGCATAAAAATCAATT
Lactobacillus fermentum IFO 3956 LAF_0624 -63 3.6 CTTGCATAATAATTCGTT
Lactobacillus plantarum WCFS1 lp_2110 -17 3.8 CTTGCATAAATAATCATA
Lactobacillus reuteri JCM 1112 LAR_0697 -253 4.7 ATTGCATAAATAAACATT
Lactobacillus rhamnosus GG LGG_01357 -56 4.3 ATTGCATAAAAATTGAAT
Lactobacillus sakei subsp. sakei 23K LSA1056 -55 4.5 ATTGCATAAATATTTATA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1540 -162 3.5 GTTACATAAATATATTTT
-82 4.3 CTTGCATAAATAAACAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0629 -59 3 GATGCATATAAATTATAA
Pediococcus pentosaceus ATCC 25745 PEPE_1136 -94 5.2 AATGTATAAAAATTCATA
Position: -189
Score: 4.3
Sequence: TTTAAATAAAAATTTAAA
Position: -187
Score: 3.8
Sequence: TAAATAAAAATTTAAATT
Position: -124
Score: 3.8
Sequence: TTTTAATCGTTATGCAAA
Position: -108
Score: 4.1
Sequence: AATATATGAATATTTATT
Position: -104
Score: 4.4
Sequence: TATGAATATTTATTCTTT
Position: -73
Score: 4.7
Sequence: ATTGCATAAATAAACATT
Locus tag: Lreu23DRAFT_0779
Lreu23DRAFT_0779 -189 4.3 TTTAAATAAAAATTTAAA
-187 3.8 TAAATAAAAATTTAAATT
-124 3.8 TTTTAATCGTTATGCAAA
-108 4.1 AATATATGAATATTTATT
-104 4.4 TATGAATATTTATTCTTT
-73 4.7 ATTGCATAAATAAACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: artPQ
Ortholog function: Arginine ABC transporter, substrate-binding and permease protein
Lactobacillus brevis ATCC 367 LVIS_1200 -161 4.6 AATGTATAAATTTTTATA
-96 4.9 AGTGTATAAAAATAGATA
Lactobacillus casei ATCC 334 LSEI_2810 -46 4.4 AATGAGTATATATTCAAT
Lactobacillus casei ATCC 334 LSEI_1344 -56 4.2 ATTGCATAAAAATCAATT
Lactobacillus plantarum WCFS1 lp_2111 -17 3.8 CTTGCATAAATAATCATA
Lactobacillus reuteri JCM 1112 LAR_0698 -253 4.7 ATTGCATAAATAAACATT
Lactobacillus rhamnosus GG LGG_02816 -46 4.4 AATGAGTATATATTCAAT
Lactobacillus rhamnosus GG LGG_01356 -56 4.3 ATTGCATAAAAATTGAAT
Lactobacillus sakei subsp. sakei 23K LSA1057 -55 4.5 ATTGCATAAATATTTATA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1541 -162 3.5 GTTACATAAATATATTTT
-82 4.3 CTTGCATAAATAAACAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0655 -62 5.3 ATTGTATAAAAATTCAAA
Pediococcus pentosaceus ATCC 25745 PEPE_1137 -94 5.2 AATGTATAAAAATTCATA
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