Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of LSEI_0081 regulog to Lactobacillus casei BL23

Reference regulog properties
Source regulog: LSEI_0081 - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Transport
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus casei BL23
Orthologous TF(s) LCABL_00850
Regulated genes 2
Built upon 7 sites [see more]
Predicted regulatory interactions in Lactobacillus casei BL23
Locus tag Position Score Sequence
Position: -53
Score: 5.4
Sequence: GTCACACATGTGTC
Locus tag: LCABL_00840
LCABL_00840 -53 5.4 GTCACACATGTGTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: LSEI_0080
Ortholog function: Predicted permease, MSF family
Lactobacillus casei ATCC 334 LSEI_0080 -53 5.4 GTCACACATGTGTC
Lactobacillus rhamnosus GG LGG_00104 -53 5.4 GTCACACATGTGTC
Position: -119
Score: 5.4
Sequence: GACACATGTGTGAC
Locus tag: LCABL_00850
LCABL_00850 -119 5.4 GACACATGTGTGAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: LSEI_0081
Ortholog function: Predicted transcriptional regulator, TetR family
Lactobacillus casei ATCC 334 LSEI_0081 -119 5.4 GACACATGTGTGAC
Lactobacillus rhamnosus GG LGG_00105 -118 5.4 GACACATGTGTGAC
Oenococcus oeni PSU-1 OEOE_0758 -141 5 GTAACAAATGTTTC
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