Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of GalR regulog to Lactobacillus plantarum JDM1

Reference regulog properties
Source regulog: GalR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Galactosides utilization; Galactose utilization
Effector: Galactose
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus plantarum JDM1
Orthologous TF(s) JDM1_2780, JDM1_2771
Regulated genes 3
Built upon 30 sites [see more]
Predicted regulatory interactions in Lactobacillus plantarum JDM1
Locus tag Position Score Sequence
Position: -196
Score: 4.8
Sequence: AAATTTTAACTAAATGACA
Position: -36
Score: 6
Sequence: AAAATTTTAGTAAAACTAT
Locus tag: JDM1_2774
JDM1_2774 -196 4.8 AAATTTTAACTAAATGACA
-36 6 AAAATTTTAGTAAAACTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: galK
Ortholog function: Galactokinase (EC 2.7.1.6)
Lactobacillus brevis ATCC 367 LVIS_1904 -38 5.9 AAAACTTTACTAAAAATTT
Lactobacillus plantarum WCFS1 lp_3482 -36 6 AAAATTTTAGTAAAACTAT
Lactobacillus reuteri JCM 1112 LAR_1662 -53 4.9 TTGTATTTAGTAAAAGTTT
Oenococcus oeni PSU-1 OEOE_0304 -231 5.5 AATATTTTAGTAAAGATTT
Pediococcus pentosaceus ATCC 25745 PEPE_0206 -193 5.2 AAAATTTAACCAAAATTAA
-33 6.3 AAAATTTTAGTAAAATTAT
Position: -266
Score: 5.9
Sequence: ATAGTTTTACTAAAATTTT
Locus tag: JDM1_2775
JDM1_2775 -266 5.9 ATAGTTTTACTAAAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lacL
Ortholog function: Beta-galactosidase large subunit (EC 3.2.1.23)
Lactobacillus fermentum IFO 3956 LAF_0247 -91 5.5 TAATATTTACTAAACTTTT
Lactobacillus plantarum WCFS1 lp_3483 -266 5.9 ATAGTTTTACTAAAATTTT
Lactobacillus reuteri JCM 1112 LAR_0276 -95 4.9 AAAATTTACGTAAATTTTA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0376 -86 5.5 AATATTTTAGTAAAAAGTA
Pediococcus pentosaceus ATCC 25745 PEPE_0205 -266 6.2 ATAATTTTACTAAAATTTT
-94 5.1 AAATTTTAACTAAAACAAC
Position: -88
Score: 5.7
Sequence: CAAATTTTACTAAAAATCA
Locus tag: JDM1_2778
JDM1_2778 -88 5.7 CAAATTTTACTAAAAATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lacS2
Ortholog function: Lactose and galactose permease, GPH translocator family
Lactobacillus plantarum WCFS1 lp_3486 -88 5.7 CAAATTTTACTAAAAATCA
Pediococcus pentosaceus ATCC 25745 PEPE_0203 -108 5.1 ACTAATTTACTAAAATAAT
-85 5.6 CAAATTTTACTAAAAAACA
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