Propagation of GalR regulog to Lactobacillus reuteri DSM 20016
| Source regulog: | GalR - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Galactosides utilization; Galactose utilization |
| Effector: | Galactose |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Lactobacillus reuteri DSM 20016 |
| Orthologous TF(s) | Lreu_0909, Lreu_1775 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -95
Score: 4.9 Sequence: AAAATTTACGTAAATTTTA
Locus tag: Lreu_0288
|
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| Lreu_0288 | -95 | 4.9 | AAAATTTACGTAAATTTTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lacL | ||||
| Ortholog function: Beta-galactosidase large subunit (EC 3.2.1.23) | ||||
| Lactobacillus fermentum IFO 3956 | LAF_0247 | -91 | 5.5 | TAATATTTACTAAACTTTT |
| Lactobacillus plantarum WCFS1 | lp_3483 | -266 | 5.9 | ATAGTTTTACTAAAATTTT |
| Lactobacillus reuteri JCM 1112 | LAR_0276 | -95 | 4.9 | AAAATTTACGTAAATTTTA |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0376 | -86 | 5.5 | AATATTTTAGTAAAAAGTA |
| Pediococcus pentosaceus ATCC 25745 | PEPE_0205 | -266 | 6.2 | ATAATTTTACTAAAATTTT |
| -94 | 5.1 | AAATTTTAACTAAAACAAC | ||
|
Position: -54
Score: 5.5 Sequence: AAACGTTTACTAAAAATAT
Locus tag: Lreu_0909
|
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| Lreu_0909 | -54 | 5.5 | AAACGTTTACTAAAAATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galR | ||||
| Ortholog function: Galactose utilization transcriptional regulator GalR, LacI family | ||||
| Lactobacillus reuteri JCM 1112 | LAR_0856 | -54 | 5.5 | AAACGTTTACTAAAAATAT |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0881 | -106 | 5.1 | TACTTTTTAGTAAATATTT |
|
Position: -128
Score: 5.4 Sequence: ATATTTTTAGTAAACGTTT
Locus tag: Lreu_0910
|
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| Lreu_0910 | -128 | 5.4 | ATATTTTTAGTAAACGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: melA | ||||
| Ortholog function: Alpha-galactosidase (EC 3.2.1.22) | ||||
| Lactobacillus plantarum WCFS1 | lp_3485 | -88 | 5.7 | CAAATTTTACTAAAAATCA |
| Lactobacillus reuteri JCM 1112 | LAR_0857 | -128 | 5.4 | ATATTTTTAGTAAACGTTT |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0882 | -106 | 5.1 | TACTTTTTAGTAAATATTT |
|
Position: -53
Score: 4.9 Sequence: TTGTATTTAGTAAAAGTTT
Locus tag: Lreu_1777
|
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| Lreu_1777 | -53 | 4.9 | TTGTATTTAGTAAAAGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galK | ||||
| Ortholog function: Galactokinase (EC 2.7.1.6) | ||||
| Lactobacillus brevis ATCC 367 | LVIS_1904 | -38 | 5.9 | AAAACTTTACTAAAAATTT |
| Lactobacillus plantarum WCFS1 | lp_3482 | -36 | 6 | AAAATTTTAGTAAAACTAT |
| Lactobacillus reuteri JCM 1112 | LAR_1662 | -53 | 4.9 | TTGTATTTAGTAAAAGTTT |
| Oenococcus oeni PSU-1 | OEOE_0304 | -231 | 5.5 | AATATTTTAGTAAAGATTT |
| Pediococcus pentosaceus ATCC 25745 | PEPE_0206 | -193 | 5.2 | AAAATTTAACCAAAATTAA |
| -33 | 6.3 | AAAATTTTAGTAAAATTAT | ||