Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of YtrA regulog to Lactobacillus rhamnosus HN001

Reference regulog properties
Source regulog: YtrA - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Hypothetical ABC transporter
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus rhamnosus HN001
Orthologous TF(s) LRH_08648
Regulated genes 1
Built upon 8 sites [see more]
Predicted regulatory interactions in Lactobacillus rhamnosus HN001
Locus tag Position Score Sequence
Position: -46
Score: 6.7
Locus tag: LRH_08648
Supported by regulated orthologs from reference regulons
Ortholog gene name: ytrA
Ortholog function: Predicted transcriptional regulator, GntR family
Lactobacillus brevis ATCC 367 LVIS_0408 -60 6.7 GTGTACTAGGTATAATAGTACAG
Lactobacillus plantarum WCFS1 lp_1959 -49 6.3 GTGTACTAGTTGTAGTAATACAC
Lactobacillus rhamnosus GG LGG_02246 -46 6.7 GTGTACTGCGTATAATAGTACAC
Lactobacillus sakei subsp. sakei 23K LSA1419 -61 6.8 GTGTACTACGTATAATAGTACAG
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0050 -123 6.6 GTGTACTGTGTATTATAGTACAC