Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NihR regulog to Lactobacillus johnsonii FI9785

Reference regulog properties
Source regulog: NihR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Nickel homeostasis
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus johnsonii FI9785
Orthologous TF(s) No orthologous TFs found
Regulated genes 1
Built upon 10 sites [see more]
Predicted regulatory interactions in Lactobacillus johnsonii FI9785
Locus tag Position Score Sequence
Position: -170
Score: 4.5
Sequence: TATTACATTTGGTAAT
Locus tag: FI9785_551
FI9785_551 -170 4.5 TATTACATTTGGTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: LSA0788
Ortholog function: Predicted glycerol uptake facilitator protein
Lactobacillus brevis ATCC 367 LVIS_1853 -134 4.7 CTTAACATTTGGTAAT
Lactobacillus fermentum IFO 3956 LAF_1730 -127 4.4 TTTTCCTTATGTAACA
Lactobacillus sakei subsp. sakei 23K LSA0788 -148 5 TTGAACATTTGTTAAC
Pediococcus pentosaceus ATCC 25745 PEPE_1691 -95 4.9 TGTAACAAATGTTATA
© 2009-2020 RegPrecise