Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CcpA regulog to Lactobacillus crispatus ST1

Reference regulog properties
Source regulog: CcpA - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Carbon catabolism
Effector: HPr, phosphocarrier protein; Fructose-1,6-bisphosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus crispatus ST1
Orthologous TF(s) LCRIS_00430
Regulated genes 37
Built upon 561 sites [see more]
Predicted regulatory interactions in Lactobacillus crispatus ST1
Locus tag Position Score Sequence
Position: -196
Score: 4.6
Sequence: ATGTAAACGTTTTATT
Position: -165
Score: 4.6
Sequence: ATGATAACGCATTCAA
Position: -28
Score: 4.5
Sequence: AAGACAACGCTTTCAT
Locus tag: LCRIS_00399
LCRIS_00399 -196 4.6 ATGTAAACGTTTTATT
-165 4.6 ATGATAACGCATTCAA
-28 4.5 AAGACAACGCTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: scrB
Ortholog function: Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
Lactobacillus acidophilus NCFM LBA0400 -220 4.9 ATGTAAACGCTTTTAT
-188 4.5 ATGATAACGTATTCAA
-31 4.6 AAGATAACGCTTACAT
Lactobacillus johnsonii NCC 533 LJ0518 -214 4.7 GTGTAAGCGTTTTAAA
-184 4.3 ATGATAGCGTATTCTA
-37 4.6 AAGAATGCGTTTACAT
Lactobacillus plantarum WCFS1 lp_0187 -213 4.3 ATGCAAGCGCTTTACA
-59 4.6 GTGTAAGCGGTTTTAT
Lactobacillus sakei subsp. sakei 23K LSA1793 -188 4.5 TTGTAAACGCTTTTCA
-163 4.3 ATACAACCGTTTACAT
-59 4.1 TATCAAACGTTTACAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0065 -121 4.1 ATTTAACCGCTTTTTT
-33 4.5 AAGAATACGTTTACAA
Pediococcus pentosaceus ATCC 25745 PEPE_0519 -213 4.3 ATGCAAGCGCTTTACA
-59 4.6 GTGTAAGCGGTTTTAT
Position: -197
Score: 4.5
Sequence: ATGAAAGCGTTGTCTT
Position: -60
Score: 4.7
Sequence: TTGAATGCGTTATCAT
Position: -29
Score: 4.5
Sequence: AATAAAACGTTTACAT
Locus tag: LCRIS_00400
LCRIS_00400 -197 4.5 ATGAAAGCGTTGTCTT
-60 4.7 TTGAATGCGTTATCAT
-29 4.5 AATAAAACGTTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: scrA
Ortholog function: Sucrose-specific PTS system, IIABC component (EC 2.7.1.69)
Lactobacillus acidophilus NCFM LBA0401 -219 4.7 ATGTAAGCGTTATCTT
-30 4.9 ATAAAAGCGTTTACAT
Lactobacillus fermentum IFO 3956 LAF_1578 -126 4.4 TTGGCAGCGATTTCAA
-57 4.5 AGAAAAGCGCTTACAA
Lactobacillus johnsonii NCC 533 LJ0519 -214 4.6 ATGTAAACGCATTCTT
-37 4.4 TTTAAAACGCTTACAC
Lactobacillus plantarum WCFS1 lp_0185 -212 4.3 ATAAAACCGCTTACAC
-157 4 ATGTCAGCGTTTCAAA
-58 4.1 TGTAAAGCGCTTGCAT
Lactobacillus sakei subsp. sakei 23K LSA1792 -183 4.2 ATGTAAACGTTTGATA
-54 4.5 TGAAAAGCGTTTACAA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0066 -52 4.2 CATTAAGCGTTTTCAA
Pediococcus pentosaceus ATCC 25745 PEPE_0518 -212 4.3 ATAAAACCGCTTACAC
-157 4 ATGTCAGCGTTTCAAA
-58 4.1 TGTAAAGCGCTTGCAT
Position: -89
Score: 4.5
Sequence: ATGCAAACGTTTACAG
Locus tag: LCRIS_00429
LCRIS_00429 -89 4.5 ATGCAAACGTTTACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: pepQ
Ortholog function: Xaa-Pro dipeptidase (EC 3.4.13.9)
Lactobacillus acidophilus NCFM LBA0430 -85 4.6 TTGCAAACGTTTACAG
Lactobacillus brevis ATCC 367 LVIS_1204 -103 4.9 TTGAAAACGTTTTCGA
Lactobacillus casei ATCC 334 LSEI_0808 -229 4.2 ATGCAAGCGTTTTACT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_1474 -89 4 GTGCAATCGCTTACAG
Lactobacillus helveticus DPC 4571 lhv_0456 -86 4.6 GTGCAAACGTTTACAT
Lactobacillus johnsonii NCC 533 LJ0490 -85 4.2 TTGCAACCGTTTACGA
Lactobacillus plantarum WCFS1 lp_2258 -158 5.2 TTGAAATCGCTTTCAT
Lactobacillus sakei subsp. sakei 23K LSA0414 -120 4.1 ATGCAAGCGGTTTACA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0419 -125 4 TTGCAAGCGTTTCATA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0543 -124 4.9 TTGCAAACGCTTACAA
-102 4.2 TTATAAGTGTTTTCAT
Pediococcus pentosaceus ATCC 25745 PEPE_1251 -109 4.6 ATGAATACGTTATCAA
Position: -77
Score: 4.4
Sequence: CTGTAAACGTTTGCAT
Locus tag: LCRIS_00430
LCRIS_00430 -77 4.4 CTGTAAACGTTTGCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ccpA
Ortholog function: Carbon catabolism global transcriptional regulator CcpA, LacI family
Lactobacillus acidophilus NCFM LBA0431 -75 4.4 CTGTAAACGTTTGCAA
Lactobacillus brevis ATCC 367 LVIS_1203 -107 4.7 TCGAAAACGTTTTCAA
-49 4.1 TTGAAAACGGATGAAA
Lactobacillus casei ATCC 334 LSEI_0809 -94 4 AGTAAAACGCTTGCAT
Lactobacillus helveticus DPC 4571 lhv_0457 -76 4.3 ATGTAAACGTTTGCAC
Lactobacillus johnsonii NCC 533 LJ0491 -74 4 TCGTAAACGGTTGCAA
Lactobacillus plantarum WCFS1 lp_2256 -121 5.2 ATGAAAGCGATTTCAA
-51 4 ATGAAAACGGATGAAA
Lactobacillus rhamnosus GG LGG_00793 -95 4 AGTAAAACGCTTGCAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0544 -114 4.4 ATGAAAACACTTATAA
-92 4.9 TTGTAAGCGTTTGCAA
Oenococcus oeni PSU-1 OEOE_0684 -59 4.6 ATGTAATCGCTTGCAT
Pediococcus pentosaceus ATCC 25745 PEPE_1250 -69 4.6 TTGATAACGTATTCAT
Position: -41
Score: 4.5
Sequence: ATAAAAGCGGATTCAT
Locus tag: LCRIS_00457
LCRIS_00457 -41 4.5 ATAAAAGCGGATTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: manL
Ortholog function: Mannose-specific PTS system, IIAB component (EC 2.7.1.69)
Lactobacillus acidophilus NCFM LBA0452 -42 4.5 ATAAAAGCGGATTCAT
Lactobacillus fermentum IFO 3956 LAF_0391 -140 4.7 TAGTAAGCGTTTACAG
Lactobacillus helveticus DPC 4571 lhv_0480 -42 4.5 ATAAAAGCGGATTCAT
Lactobacillus johnsonii NCC 533 LJ0503 -106 4.4 ATGCAAGCATTTTCAA
-68 4.1 AAGCAAACGTATACAT
Lactobacillus plantarum WCFS1 lp_0575 1 4 TGGTAAGCATTATCAT
Lactobacillus sakei subsp. sakei 23K LSA0449 -136 4.2 AGTAAAGCGTTTTAAA
-57 4.6 TTGTTAGCGTTTTTAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0086 -109 4.3 TAGAAATCGTTTACAC
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0654 -131 4.3 TAGTAAGTGTTTTCAA
-61 4.1 ATGAAAAGGCTTTATT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1768 -100 4.7 ATGTAAACGGTAACAA
-75 5.4 TTGAAAGCGTTTACAA
Pediococcus pentosaceus ATCC 25745 PEPE_1518 -146 4.5 TTGAAAGCGTTTTTTG
Position: -165
Score: 4.5
Sequence: AAGGAATCGCTTTCAT
Locus tag: LCRIS_00464
LCRIS_00464 -165 4.5 AAGGAATCGCTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhE
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Lactobacillus acidophilus NCFM LBA0461 -161 4.3 AAGCAAGCGCTTCCAT
Lactobacillus brevis ATCC 367 LVIS_0119 -173 4.4 CTGTATGCGCTTACAT
Lactobacillus fermentum IFO 3956 LAF_0277 -197 4.7 TTGAAAACGCTTTCTC
Lactobacillus johnsonii NCC 533 LJ1766 -162 4.5 ATGTAACCGATAACAT
Lactobacillus reuteri JCM 1112 LAR_0310 -132 4.8 TTGTAAGCGAATTCAT
Lactobacillus sakei subsp. sakei 23K LSA0379 -74 4.5 TTACAAACGGTTTCAA
Position: -62
Score: 4.6
Sequence: TTGTAAACGCTTACTG
Locus tag: LCRIS_00467
LCRIS_00467 -62 4.6 TTGTAAACGCTTACTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: mtlA
Ortholog function: Mannitol-specific PTS system, IIBC component (EC 2.7.1.69)
Lactobacillus casei ATCC 334 LSEI_2888 -65 4.5 TTGTCAGCGATTACAT
Lactobacillus plantarum WCFS1 lp_0230 -63 4.8 TTGAAACCGCTTACCA
Lactobacillus rhamnosus GG LGG_02912 -65 4.5 TTGTCAGCGATTACAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1620 -56 4.2 CAGTAAACGTTATCAT
Position: -45
Score: 5.1
Sequence: TTGAAAGCGTTTTTAT
Locus tag: LCRIS_00475
LCRIS_00475 -45 5.1 TTGAAAGCGTTTTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pck
Ortholog function: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
Lactobacillus johnsonii NCC 533 LJ0149 -38 5 TTGAAACCGCTTTCTA
Lactobacillus plantarum WCFS1 lp_3418 -68 4.8 AAGAAAACGCTTTCTT
Lactobacillus rhamnosus GG LGG_01876 -85 4.4 GTGAAAGCCTTTTCAA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0395 -46 4.4 ATGAAAGCGTATTATA
Position: -79
Score: 4.1
Sequence: ATGGAACCAGTTACAT
Locus tag: LCRIS_00511
LCRIS_00511 -79 4.1 ATGGAACCAGTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcaD
Ortholog function: NADH peroxidase (EC 1.11.1.1)
Lactobacillus acidophilus NCFM LBA1401 -52 4.4 ATGAAAGAGGTTACAA
Lactobacillus plantarum WCFS1 lp_2544 -200 4.3 TTGTAACCGTTTTAGT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0137 -56 3.8 GTGAAAACGTTCTATA
Pediococcus pentosaceus ATCC 25745 PEPE_1619 -81 4.7 TTATAAGCGTTTTAAT
-66 4.1 TTGTAAGCGGTTCACA
Position: -109
Score: 4.4
Sequence: ATGTAAACTGTTACAT
Locus tag: LCRIS_00651
LCRIS_00651 -109 4.4 ATGTAAACTGTTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ptsH
Ortholog function: Phosphotransferase system, HPr-related protein
Lactobacillus acidophilus NCFM LBA0639 -111 4.4 ATGTAAACTGTTACAT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_0512 -108 4.7 ATGAAAACATTTACAA
Lactobacillus helveticus DPC 4571 lhv_0686 -109 4.4 ATGTAAGCTATTACAT
Lactobacillus johnsonii NCC 533 LJ0816 -109 4.6 ATGTAAACATTTACAT
Lactobacillus plantarum WCFS1 lp_1273 -135 4 ATGAAAGGGCTTGTAT
Lactobacillus reuteri JCM 1112 LAR_1256 -102 4 TATTTAACGCTTACAA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0388 -91 4.1 TTGTTATCGTTTGCAT
-68 4.2 ATGTAAACGTGTTCTT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1780 -157 5.3 ATGTAAACGTTTTCAT
-63 4.7 TTGTAAGCGCTTTGAT
Pediococcus pentosaceus ATCC 25745 PEPE_0609 -127 4 ATGTAAGGGCTTGCTT
Position: -46
Score: 4.7
Sequence: TTGAAAGCGCTTTAGA
Locus tag: LCRIS_00689
LCRIS_00689 -46 4.7 TTGAAAGCGCTTTAGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pgm
Ortholog function: D-Ribose 1,5-phosphomutase (EC 5.4.2.7)
Lactobacillus casei ATCC 334 LSEI_0949 -102 3.9 TTGAGCGCGTTTTCAA
Lactobacillus johnsonii NCC 533 LJ0862 -121 4.3 ATAAAAGCGTTTAATA
Lactobacillus plantarum WCFS1 lp_0764 -40 4.4 TTGTAAGCACTAACAA
Lactobacillus rhamnosus GG LGG_00921 -100 3.9 TTGAGCGCGTTTTCAA
Pediococcus pentosaceus ATCC 25745 PEPE_0446 -77 4.1 AAAAAAACGCTTTCTG
Position: -148
Score: 4.7
Sequence: TTGACACCGCTTACAA
Locus tag: LCRIS_00729
LCRIS_00729 -148 4.7 TTGACACCGCTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: licT
Ortholog function: Beta-glucoside bgl operon transcriptional antiterminator, BglG family
Lactobacillus acidophilus NCFM LBA0724 -196 4.3 TTTAAAACATTTTCAT
-163 4.8 TTGACACCGCTTTCAA
Lactobacillus johnsonii NCC 533 LJ0623 -141 4.7 ATGTAAGCGCTATTAT
Lactobacillus plantarum WCFS1 lp_3529 -160 4.7 TTGACACCGCTTACAA
Position: -58
Score: 4.3
Sequence: AAGAAAAGGGTTTCAT
Locus tag: LCRIS_00749
LCRIS_00749 -58 4.3 AAGAAAAGGGTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pmi
Ortholog function: Mannose-6-phosphate isomerase (EC 5.3.1.8)
Lactobacillus acidophilus NCFM LBA0745 -58 4.3 AAGAAAAGGGTTTCAT
Lactobacillus brevis ATCC 367 LVIS_1656 -86 4.8 TAGAAAGCGCTTGCAA
Lactobacillus helveticus DPC 4571 lhv_0789 -58 4.3 AAGAAAAGGGTTTCAT
Lactobacillus johnsonii NCC 533 LJ0916 -60 4.6 TTGAAAGTGGTTTCAA
Lactobacillus sakei subsp. sakei 23K LSA1146 -99 4.1 ACGAAATCGCTTTAAA
Oenococcus oeni PSU-1 OEOE_0249 -30 4.9 ATGATAACGCTTACAT
Pediococcus pentosaceus ATCC 25745 PEPE_1334 -21 4.3 ATGAAAGGGGTTTTAT
Position: -34
Score: 4.5
Sequence: ATGAAAGCACTTACAG
Locus tag: LCRIS_00899
LCRIS_00899 -34 4.5 ATGAAAGCACTTACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: bglB
Ortholog function: Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86)
Lactobacillus acidophilus NCFM LBA0885 -35 4.8 ATGAAAGCGATTACAG
Lactobacillus helveticus DPC 4571 lhv_0941 -34 4 CTGAAAGCACTTACAG
Lactobacillus johnsonii NCC 533 LJ0194 -28 4.7 ATGTAAGCGATTGCAA
Lactobacillus plantarum WCFS1 lp_3011 -43 4.5 AGGAAAGCGTTTTCCA
Oenococcus oeni PSU-1 OEOE_1210 -93 4.5 ATGGTAGCGATTTCAT
Pediococcus pentosaceus ATCC 25745 PEPE_1776 -34 4.8 ATGAAAGCGAATTCAA
Position: -135
Score: 4.2
Sequence: ATGTAAGTGCTAACAA
Locus tag: LCRIS_01007
LCRIS_01007 -135 4.2 ATGTAAGTGCTAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pfk
Ortholog function: 6-phosphofructokinase (EC 2.7.1.11)
Lactobacillus acidophilus NCFM LBA0956 -134 4.2 ATGTAAGTGCTAACAT
Lactobacillus helveticus DPC 4571 lhv_1049 -136 4.2 ATGTAAGTGCTAACAT
Lactobacillus johnsonii NCC 533 LJ1079 -132 4.5 TTGAAAGCGAAAACAT
Pediococcus pentosaceus ATCC 25745 PEPE_1093 -116 4 AATAAAGCACTTACAT
Position: -37
Score: 4.6
Sequence: ATGTAAACGGATACAA
Locus tag: LCRIS_01250
LCRIS_01250 -37 4.6 ATGTAAACGGATACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: arcA
Ortholog function: Arginine deiminase (EC 3.5.3.6)
Lactobacillus fermentum IFO 3956 LAF_0300 -65 4.7 TTGAAAACGCTTGCTA
Lactobacillus reuteri JCM 1112 LAR_0435 -72 4.7 TTGACAACGTTTACAT
Pediococcus pentosaceus ATCC 25745 PEPE_1629 -119 5 ATGAAAACGTTTTAAA
-55 4.5 GTGAAAGCGCTTGCTA
Position: -148
Score: 4.8
Sequence: AAGTAAGCGCTATCAT
Locus tag: LCRIS_01408
LCRIS_01408 -148 4.8 AAGTAAGCGCTATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: scrR
Ortholog function: Sucrose operon repressor ScrR, LacI family
Lactobacillus sakei subsp. sakei 23K LSA1794 -188 4.5 TTGTAAACGCTTTTCA
-163 4.3 ATACAACCGTTTACAT
-59 4.1 TATCAAACGTTTACAT
Position: -31
Score: 4.7
Sequence: ATGAAAGCGAATACAA
Locus tag: LCRIS_01410
LCRIS_01410 -31 4.7 ATGAAAGCGAATACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: galM
Ortholog function: Aldose 1-epimerase (EC 5.1.3.3)
Lactobacillus acidophilus NCFM LBA1457 -36 4.3 CTGAAAACGATTACAG
Lactobacillus casei ATCC 334 LSEI_0668 -65 4.7 ATAAAAACGGTTACAA
Lactobacillus helveticus DPC 4571 lhv_1499 -37 4.8 TTGAAAACGATTACAG
Lactobacillus johnsonii NCC 533 LJ0861 -36 5.1 ATGAAAACGATTACAA
Lactobacillus rhamnosus GG LGG_00657 -64 4.7 ATAAAAACGGTTACAA
Position: -37
Score: 4.8
Sequence: TTGAAAACGATTACAG
Locus tag: LCRIS_01412
LCRIS_01412 -37 4.8 TTGAAAACGATTACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: galK
Ortholog function: Galactokinase (EC 2.7.1.6)
Lactobacillus acidophilus NCFM LBA1459 -36 4.3 CTGAAAACGATTACAG
Lactobacillus brevis ATCC 367 LVIS_1904 -98 4.7 ATGAAAACGTTTTATA
Lactobacillus fermentum IFO 3956 LAF_1792 -99 4.1 ATGTAAGCGCTCTATT
Lactobacillus helveticus DPC 4571 lhv_1501 -37 4.8 TTGAAAACGATTACAG
Lactobacillus johnsonii NCC 533 LJ0859 -36 5.1 ATGAAAACGATTACAA
Lactobacillus reuteri JCM 1112 LAR_1662 -125 4.5 GTGTAATCGTTTTCTT
-93 4.4 TTGTAAGCGCTTATTG
Position: -42
Score: 4.6
Sequence: ATGTAAACGATTACAG
Locus tag: LCRIS_01414
LCRIS_01414 -42 4.6 ATGTAAACGATTACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: lacS
Ortholog function: Lactose and galactose permease, GPH translocator family
Lactobacillus fermentum IFO 3956 LAF_0779 -92 4.2 TCGTAATCGGTTTCAT
Lactobacillus helveticus DPC 4571 lhv_1543 -41 4.6 GTGTAAGCGATTTCTA
Lactobacillus plantarum WCFS1 lp_3468 -177 4.2 AATAATACGCTTTCAT
-66 4.6 ATGAAAGCGCTTATCA
Lactobacillus reuteri JCM 1112 LAR_1033 -42 4.7 TTGTAAGCGATTACAG
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1065 -80 4.5 CTGTAAGCGCTTCCAT
Position: -47
Score: 4.8
Sequence: ATAAAACCGTTTTCAA
Locus tag: LCRIS_01416
LCRIS_01416 -47 4.8 ATAAAACCGTTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lacL
Ortholog function: Beta-galactosidase large subunit (EC 3.2.1.23)
Lactobacillus acidophilus NCFM LBA1467 -47 5 ATAAAAGCGTTTTCAA
Lactobacillus brevis ATCC 367 LVIS_2259 -32 4.5 GTGTAAGCGTTTTATA
Lactobacillus fermentum IFO 3956 LAF_0247 -48 5 TTGAAACCGTTATCAT
Lactobacillus helveticus DPC 4571 lhv_1549 -46 4.4 ATAAAAGCTCTTTCAA
Lactobacillus johnsonii NCC 533 LJ0855 -45 4.4 ATAAAAGCGTCTTCAA
Lactobacillus plantarum WCFS1 lp_3483 -43 5 TTGTAAGCGTTTTTAT
Lactobacillus reuteri JCM 1112 LAR_0276 -53 4.4 ATGAAAGCGCTATACT
Lactobacillus sakei subsp. sakei 23K LSA1711 -37 4.9 ATGAAACCGTTTTAAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0376 -32 4.5 ATGTAAGCATTTTCTT
Pediococcus pentosaceus ATCC 25745 PEPE_0205 -41 4.8 TTGTAAGCGTTTTATA
Position: -139
Score: 4.8
Sequence: TTGCAATCGCTTTCAA
Locus tag: LCRIS_01590
LCRIS_01590 -139 4.8 TTGCAATCGCTTTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glcT
Ortholog function: Beta-glucoside bgl operon antiterminator, BglG family
Lactobacillus acidophilus NCFM LBA1479 -138 4.7 TTGCAATCGCTTACAT
Lactobacillus johnsonii NCC 533 LJ1262 -143 4.6 TTGCAATCGTTTACAT
Position: -68
Score: 4.7
Sequence: TTGTAAACGCTTTATA
Locus tag: LCRIS_01661
LCRIS_01661 -68 4.7 TTGTAAACGCTTTATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gabD
Ortholog function: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16)
Lactobacillus acidophilus NCFM LBA1632 -66 4.7 TTGTAAACGCTTTATA
Lactobacillus brevis ATCC 367 LVIS_0323 -150 4.9 TTGAAAACGGTTAAAT
Lactobacillus casei ATCC 334 LSEI_2278 -18 4.1 AAGGGAGCGTTTTCAA
Lactobacillus fermentum IFO 3956 LAF_0045 -62 4.3 GAAAAAGCGGTTACAA
Lactobacillus johnsonii NCC 533 LJ0671 -44 4.6 AAGAAAGCGCTTTATA
Lactobacillus plantarum WCFS1 lp_3092 -45 4 GATTAACCGTTTACAA
Lactobacillus reuteri JCM 1112 LAR_0033 -132 4.1 ATAAAAGGGCTTTTAT
-30 4.6 ATGTAAGCGTTTATTT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1298 -37 4.3 ATGTAAGCGTACTCAA
Pediococcus pentosaceus ATCC 25745 PEPE_1821 -55 4.8 ATGAAAGCGTATTCTT
Position: -58
Score: 4.2
Sequence: TTTTTAGCGCTTTCTA
Locus tag: LCRIS_01697
LCRIS_01697 -58 4.2 TTTTTAGCGCTTTCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: coaA
Ortholog function: Pantothenate kinase (EC 2.7.1.33)
Lactobacillus fermentum IFO 3956 LAF_1646 -35 4 ATGTAAGGGCTATCCA
Lactobacillus plantarum WCFS1 lp_0913 -61 4.2 TTGATAAGGGTTTCAT
Lactobacillus reuteri JCM 1112 LAR_1512 -44 4.6 GAGTAACCGTTTTCAT
Lactobacillus sakei subsp. sakei 23K LSA0138 -44 3.8 ATGTAACCGTTTAGCA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1538 -75 4.2 TTGAAAGCGTAATATT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1881 -107 4.1 TTGTATACTGTTTCAT
Position: -102
Score: 4.4
Sequence: GTGAAAACGAATACAT
Locus tag: LCRIS_01713
LCRIS_01713 -102 4.4 GTGAAAACGAATACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: simA
Ortholog function: Maltose-6'-phosphate glucosidase (EC 3.2.1.122)
Lactobacillus acidophilus NCFM LBA1689 -100 4.5 GTGAAAGCGAATACAT
Lactobacillus casei ATCC 334 LSEI_0369 -105 4.9 TTGAAACCGCTTGCAT
Lactobacillus johnsonii NCC 533 LJ0635 -127 5.2 TTGAAAACGCTTTCTT
Position: -37
Score: 4.2
Sequence: GAGAAAGCGAATACAA
Locus tag: LCRIS_01807
LCRIS_01807 -37 4.2 GAGAAAGCGAATACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fruR
Ortholog function: Fructose utilization transcriptional regulator FruR, DeoR family
Lactobacillus acidophilus NCFM LBA1779 -37 4.2 GAGAAAGCGAATACAA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_1889 -164 4 GAGAAAGCCTTTACAA
Lactobacillus helveticus DPC 4571 lhv_1846 12 4.3 GAGAAAGCGGATACAA
Lactobacillus johnsonii NCC 533 LJ0570 -40 4.1 CTGAAAGCGTTTATCA
Lactobacillus plantarum WCFS1 lp_2095 -6 4.3 TTGAAAGTGCTTACAG
Lactobacillus sakei subsp. sakei 23K LSA1048 -130 4 ATGAAAACCTTTACAC
-40 4.3 TTGTAAACGATGACAT
Pediococcus pentosaceus ATCC 25745 PEPE_1166 -6 4.3 ATGAAAGTGCTTACAG
Position: -42
Score: 4.8
Sequence: TTGAAAGCGAATACAT
Locus tag: LCRIS_01830
LCRIS_01830 -42 4.8 TTGAAAGCGAATACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: agl3
Ortholog function: Oligo-1,6-glucosidase (EC 3.2.1.10)
Lactobacillus acidophilus NCFM LBA1812 -40 4.8 TTGAAAGCGAATACAT
Lactobacillus johnsonii NCC 533 LJ0569 -35 4.8 TTGAAAGCGAATACAA
Lactobacillus plantarum WCFS1 lp_3534 -104 4.6 GTGTAAACGTTTACTT
-72 4.7 TTGTAAACGTTTACGT
Lactobacillus reuteri JCM 1112 LAR_0972 -66 4.5 ACGAAAACGTTTACAT
Position: -76
Score: 4.4
Sequence: TGTAAACCGCTTTCAA
Position: -50
Score: 4.6
Sequence: ATGAAAGCGTAAACAA
Locus tag: LCRIS_01895
LCRIS_01895 -76 4.4 TGTAAACCGCTTTCAA
-50 4.6 ATGAAAGCGTAAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mapA
Ortholog function: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64)
Lactobacillus acidophilus NCFM LBA1870 -74 4.4 TGTAAACCGCTTTCAA
-48 4.6 ATGAAAGCGTAAACAA
Lactobacillus casei ATCC 334 LSEI_0982 -127 4.5 ATGATAGCGGTAACAT
Lactobacillus helveticus DPC 4571 lhv_2000 -76 4.4 TGTAAACCGCTTTCAA
Lactobacillus johnsonii NCC 533 LJ0213 -70 4.5 TGTTAAGCGCTTTCAA
Position: -77
Score: 4.5
Sequence: TTGATACCGCTAACAA
Position: -50
Score: 4.5
Sequence: TTGAAAACGGTTTCTC
Locus tag: LCRIS_01897
LCRIS_01897 -77 4.5 TTGATACCGCTAACAA
-50 4.5 TTGAAAACGGTTTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: agl
Ortholog function: Oligo-1,6-glucosidase (EC 3.2.1.10)
Lactobacillus acidophilus NCFM LBA1872 -49 5 TTGAAAACGGTTTCTT
Lactobacillus casei ATCC 334 LSEI_0980 -80 4.4 TTGATAACGGTAACAA
Lactobacillus helveticus DPC 4571 lhv_2002 -34 4.3 TTGAAAACGGTTTCCC
Lactobacillus johnsonii NCC 533 LJ0211 -53 5 TTGTAAGCGCTTATAA
Position: -109
Score: 4.3
Sequence: ACAAAAGCGTTTTCAT
Locus tag: LCRIS_02019
LCRIS_02019 -109 4.3 ACAAAAGCGTTTTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: spxB
Ortholog function: Pyruvate oxidase (EC 1.2.3.3)
Lactobacillus acidophilus NCFM LBA1974 -110 4.4 GAAAAAGCGGTTTCAT
-78 4 AAGATAGCGTTTTGAA
Lactobacillus brevis ATCC 367 LVIS_0313 -152 4.3 TTGAAAGCGTGAACAA
Lactobacillus casei ATCC 334 LSEI_1784 -149 4 GTTTAAGCGTTTTATA
-92 4.4 ATGAAAGGGCTTGCAT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_2034 -76 4 TTGATAGCACTTGCAA
Lactobacillus johnsonii NCC 533 LJ1853 -79 4.1 CAGCAACCGCTTTCAA
Lactobacillus plantarum WCFS1 lp_0849 -390 4.3 ATGTAAGCGTCATCAT
-86 4.9 ATAAAAGCGTTTACAT
Lactobacillus rhamnosus GG LGG_01836 -136 4.6 ATTAAAGCGCTTTCCT
-89 4.1 GTGAAAGGGTTTGCAT
Lactobacillus sakei subsp. sakei 23K LSA1830 -71 4.1 TTTGTAACGCTTACAA
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