Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of ArgR regulog to Lactobacillus crispatus ST1

Reference regulog properties
Source regulog: ArgR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: ArgR
Regulation mode: repressor, activator
Biological process: Arginine degradation; Arginine biosynthesis
Effector: Arginine
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus crispatus ST1
Orthologous TF(s) No orthologous TFs found
Regulated genes 2
Built upon 27 sites [see more]
Predicted regulatory interactions in Lactobacillus crispatus ST1
Locus tag Position Score Sequence
Position: -66
Score: 3.9
Sequence: TCTTTATAATTAAAAAAT
Position: -55
Score: 3.8
Sequence: AAAAAATAATTAACAAAT
Locus tag: LCRIS_00125
LCRIS_00125 -66 3.9 TCTTTATAATTAAAAAAT
-55 3.8 AAAAAATAATTAACAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: artPQ
Ortholog function: Arginine ABC transporter, substrate-binding and permease protein
Lactobacillus brevis ATCC 367 LVIS_1200 -161 4.6 AATGTATAAATTTTTATA
-96 4.9 AGTGTATAAAAATAGATA
Lactobacillus casei ATCC 334 LSEI_2810 -46 4.4 AATGAGTATATATTCAAT
Lactobacillus casei ATCC 334 LSEI_1344 -56 4.2 ATTGCATAAAAATCAATT
Lactobacillus plantarum WCFS1 lp_2111 -17 3.8 CTTGCATAAATAATCATA
Lactobacillus reuteri JCM 1112 LAR_0698 -253 4.7 ATTGCATAAATAAACATT
Lactobacillus rhamnosus GG LGG_02816 -46 4.4 AATGAGTATATATTCAAT
Lactobacillus rhamnosus GG LGG_01356 -56 4.3 ATTGCATAAAAATTGAAT
Lactobacillus sakei subsp. sakei 23K LSA1057 -55 4.5 ATTGCATAAATATTTATA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1541 -162 3.5 GTTACATAAATATATTTT
-82 4.3 CTTGCATAAATAAACAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0655 -62 5.3 ATTGTATAAAAATTCAAA
Pediococcus pentosaceus ATCC 25745 PEPE_1137 -94 5.2 AATGTATAAAAATTCATA