Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Rex regulog to Lactobacillus reuteri JCM 1112

Reference regulog properties
Source regulog: Rex - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus reuteri JCM 1112
Orthologous TF(s) LAR_0341
Regulated genes 6
Built upon 68 sites [see more]
Predicted regulatory interactions in Lactobacillus reuteri JCM 1112
Locus tag Position Score Sequence
Position: -164
Score: 5.2
Sequence: TTGTGAATATTATGACAA
Locus tag: LAR_0029
LAR_0029 -164 5.2 TTGTGAATATTATGACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dhaT
Ortholog function: 1,3-propanediol dehydrogenase (EC 1.1.1.202)
Lactobacillus plantarum WCFS1 lp_3051 -116 5 TTGTGAAAAATATAATTA
Lactobacillus reuteri JCM 1112 LAR_0029 -164 5.2 TTGTGAATATTATGACAA
Lactobacillus sakei subsp. sakei 23K LSA0122 -35 5.3 TTGTGAAATAATTCAGAA
Position: -245
Score: 5.1
Sequence: TTGTGAGTAATTTTACAA
Locus tag: LAR_0064
LAR_0064 -245 5.1 TTGTGAGTAATTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: noxE
Ortholog function: NADH oxidase (EC 1.6.99.3)
Lactobacillus plantarum WCFS1 lp_3449 -36 5 TTGTGAATATAAACACAT
Lactobacillus reuteri JCM 1112 LAR_0064 -245 5.1 TTGTGAGTAATTTTACAA
-35 4.6 TTGTGAAAATCAGAACAT
Position: -104
Score: 5.1
Sequence: TTGTTTAAATGTTCACAA
Locus tag: LAR_0310
LAR_0310 -104 5.1 TTGTTTAAATGTTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhE
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
Lactobacillus acidophilus NCFM LBA0461 -45 5.5 TTGTAAATTAGTTCACAA
Lactobacillus brevis ATCC 367 LVIS_0119 -105 5 TTGTGATTTTTTTAACAT
-47 4.8 TCGTGAAGAAGTTAACAA
Lactobacillus casei ATCC 334 LSEI_0775 -106 5 TCGTGAAAAAATTCACCA
-85 4.7 TTGTTTACAAAATCACAA
-49 5.4 TTGTGAAATGGTTAACAA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_1581 -47 5.2 TTGAGAAATTGATCACAA
Lactobacillus fermentum IFO 3956 LAF_0277 -151 4.9 TTGAAATTTAATTCACAA
-85 4.5 TTGTTGACTAAATCACAA
Lactobacillus johnsonii NCC 533 LJ1766 -289 4.8 TTATTAAAATTTTAACAT
-191 5.3 TTGTGAAATATTTTTCAA
-104 5 TTGTAAAAAGATGCACAA
Lactobacillus plantarum WCFS1 lp_3662 -43 5.5 TTGTAAATTAATTCACAA
Lactobacillus reuteri JCM 1112 LAR_0310 -238 4.4 TTGTGAAATAGACTTCAA
-104 5.1 TTGTTTAAATGTTCACAA
Lactobacillus rhamnosus GG LGG_00757 -105 5.2 TCGTGAAAAAGTTCACTA
-84 4.7 TTGTTTACAAAATCACAA
-48 5.4 TTGTGAAATGGTTAACAA
Lactobacillus sakei subsp. sakei 23K LSA0379 -99 5.1 CTGTTAAAAAAATCACAA
-42 5.2 TTGTTAATTAAATCACAT
Position: -157
Score: 4.7
Sequence: TTGTATTTTAGTTCACAA
Locus tag: LAR_0341
LAR_0341 -157 4.7 TTGTATTTTAGTTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rex
Ortholog function: Redox-sensitive transcriptional regulator Rex
Lactobacillus brevis ATCC 367 LVIS_0616 -137 4.4 TTGCAAATTCTTTCACAA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_1498 -141 4.9 TTGTGAAAAAGTTCAATA
Lactobacillus reuteri JCM 1112 LAR_0341 -157 4.7 TTGTATTTTAGTTCACAA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1214 -33 5 ATGTTAAATATTTCACGA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1774 -39 4.9 TTATGCAAAAGTTCACAA
Position: -38
Score: 4.8
Sequence: TTGTTAACTTATACACAA
Locus tag: LAR_1724
LAR_1724 -38 4.8 TTGTTAACTTATACACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gldA
Ortholog function: Glycerol dehydrogenase (EC 1.1.1.6)
Lactobacillus brevis ATCC 367 LVIS_2165 -37 5.3 TTGTGAAAATAATCACGA
Lactobacillus fermentum IFO 3956 LAF_0639 -39 5 TTGTTAAAACATACACAA
Lactobacillus reuteri JCM 1112 LAR_1724 -38 4.8 TTGTTAACTTATACACAA
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