Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of PurR regulog to Lactobacillus sakei subsp. sakei 23K

Reference regulog properties
Source regulog: PurR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: PurR
Regulation mode: repressor
Biological process: Purine metabolism
Effector: 5-phosphoribosyl 1-pyrophosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus sakei subsp. sakei 23K
Orthologous TF(s) LSA1651
Regulated genes 10
Built upon 76 sites [see more]
Predicted regulatory interactions in Lactobacillus sakei subsp. sakei 23K
Locus tag Position Score Sequence
Position: -101
Score: 5.4
Sequence: AAACACGAACTAT
Locus tag: LSA0087
LSA0087 -101 5.4 AAACACGAACTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pbuO
Ortholog function: Guanine/hypoxanthine permease
Lactobacillus sakei subsp. sakei 23K LSA0087 -101 5.4 AAACACGAACTAT
Pediococcus pentosaceus ATCC 25745 PEPE_0381 -88 5.1 ATAAACGAACATT
Position: -56
Score: 4.9
Sequence: TAATACGAACATT
Locus tag: LSA0276
LSA0276 -56 4.9 TAATACGAACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: guaB
Ortholog function: Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205)
Lactobacillus casei ATCC 334 LSEI_0217 -235 4.5 AAAAACGAATGAT
-194 5.3 AAAACCGAACATT
Lactobacillus rhamnosus GG LGG_00249 -194 5.3 AAAGACGAACATT
Lactobacillus sakei subsp. sakei 23K LSA0276 -56 4.9 TAATACGAACATT
Position: -112
Score: 4.3
Sequence: TAACACGTACAAT
Position: -40
Score: 4
Sequence: AAAATCAAACCAT
Locus tag: LSA0652
LSA0652 -112 4.3 TAACACGTACAAT
-40 4 AAAATCAAACCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purE
Ortholog function: Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Lactobacillus acidophilus NCFM LBA1561 -59 4.4 ATATAAGAACAAT
Lactobacillus casei ATCC 334 LSEI_1756 -107 5.3 AAACACGAACGAT
Lactobacillus fermentum IFO 3956 LAF_0118 -106 5.2 AAATCCGAACAAT
Lactobacillus helveticus DPC 4571 lhv_1534 -73 4.1 AAATACAAACAAA
Lactobacillus plantarum WCFS1 lp_2729 -104 5 TAACACGAACATT
Lactobacillus reuteri JCM 1112 LAR_0128 -102 4.9 ATACACGAACTAT
Lactobacillus rhamnosus GG LGG_01814 -108 5.5 AAATACGAACATT
-96 4.3 TAAAACGAATAAT
Lactobacillus sakei subsp. sakei 23K LSA0652 -112 4.3 TAACACGTACAAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0515 -68 4.1 AAATTCGAATTTT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0718 -137 4.1 ATATACGAACTCT
Oenococcus oeni PSU-1 OEOE_1138 -130 4.6 AAACACGAAATAT
-79 5.3 AAAAACGAACGTT
Pediococcus pentosaceus ATCC 25745 PEPE_1467 -123 5.4 AAAAACGAACTTT
Position: -110
Score: 4.9
Sequence: ATAAACGAACTTT
Position: -95
Score: 3.8
Sequence: AATAGCGATCATT
Position: -62
Score: 3.3
Sequence: AAATAAAAACGAA
Position: -58
Score: 5.6
Sequence: AAAAACGAACAAT
Locus tag: LSA0655
LSA0655 -110 4.9 ATAAACGAACTTT
-95 3.8 AATAGCGATCATT
-62 3.3 AAATAAAAACGAA
-58 5.6 AAAAACGAACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purC
Ortholog function: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)
Lactobacillus acidophilus NCFM LBA1559 -151 5.3 AAACACGAACGAT
Lactobacillus casei ATCC 334 LSEI_1754 -107 5.3 AAACACGAACGAT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_1338 -60 3.4 AATTACGAATAGT
Lactobacillus fermentum IFO 3956 LAF_0124 -155 5.6 AAACACGAACATT
Lactobacillus plantarum WCFS1 lp_2727 -104 5 TAACACGAACATT
Lactobacillus reuteri JCM 1112 LAR_0131 -153 5.6 AAACACGAACAAT
Lactobacillus rhamnosus GG LGG_01812 -108 5.5 AAATACGAACATT
-96 4.3 TAAAACGAATAAT
Lactobacillus sakei subsp. sakei 23K LSA0655 -110 4.9 ATAAACGAACTTT
-58 5.6 AAAAACGAACAAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0663 -27 5.2 AAAGACGAACAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0720 -137 4.1 ATATACGAACTCT
Oenococcus oeni PSU-1 OEOE_1136 -130 4.6 AAACACGAAATAT
-79 5.3 AAAAACGAACGTT
Pediococcus pentosaceus ATCC 25745 PEPE_1465 -123 5.4 AAAAACGAACTTT
Position: -24
Score: 4.2
Sequence: AATCACGAATATT
Locus tag: LSA1648
LSA1648 -24 4.2 AATCACGAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glmU
Ortholog function: N-acetylglucosamine-1-phosphate uridyltransferase (EC 2.7.7.23) / Glucosamine-1-phosphate N-acetyltransferase (EC 2.3.1.157)
Lactobacillus acidophilus NCFM LBA0219 -27 4.8 AAAACCAAACATT
Lactobacillus brevis ATCC 367 LVIS_0475 -91 5.3 AAACCCGAACAAT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_0303 -54 4.3 AAAAACAGACATT
Lactobacillus fermentum IFO 3956 LAF_0195 -98 5.2 AAAGACGAACAAT
Lactobacillus helveticus DPC 4571 lhv_0235 -27 4.1 AAAGCCAAACGTT
Lactobacillus johnsonii NCC 533 LJ0208 -105 4.1 TATTACGAACAAT
Lactobacillus plantarum WCFS1 lp_0467 12 4.3 AGAAGCGAACGTT
Lactobacillus reuteri JCM 1112 LAR_0211 -64 5.2 AAATCCGAACATT
Lactobacillus sakei subsp. sakei 23K LSA1648 -24 4.2 AATCACGAATATT
Pediococcus pentosaceus ATCC 25745 PEPE_0293 -103 5.2 AAATCCGAACATT
Position: -120
Score: 5.6
Sequence: AAAAACGAACAAT
Position: -110
Score: 4.1
Sequence: AATAATGAACTTT
Locus tag: LSA1651
LSA1651 -120 5.6 AAAAACGAACAAT
-110 4.1 AATAATGAACTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purR
Ortholog function: Purine metabolism transcriptional regulator PurR, PurR family
Lactobacillus acidophilus NCFM LBA0218 -27 4.8 AAAACCAAACATT
Lactobacillus brevis ATCC 367 LVIS_0474 -91 5.3 AAACCCGAACAAT
Lactobacillus casei ATCC 334 LSEI_2587 -126 4.8 AAATGCGAACGTT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_0302 -54 4.3 AAAAACAGACATT
Lactobacillus fermentum IFO 3956 LAF_0194 -98 5.2 AAAGACGAACAAT
Lactobacillus helveticus DPC 4571 lhv_0234 -27 4.1 AAAGCCAAACGTT
Lactobacillus johnsonii NCC 533 LJ0207 -105 4.1 TATTACGAACAAT
Lactobacillus plantarum WCFS1 lp_0466 12 4.3 AGAAGCGAACGTT
Lactobacillus reuteri JCM 1112 LAR_0210 -64 5.2 AAATCCGAACATT
Lactobacillus rhamnosus GG LGG_02564 -126 4.8 AAATGCGAACGTT
Lactobacillus sakei subsp. sakei 23K LSA1651 -120 5.6 AAAAACGAACAAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0315 -116 5.4 AAAAACGAACTTT
Pediococcus pentosaceus ATCC 25745 PEPE_0292 -103 5.2 AAATCCGAACATT
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