Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagated regulons of Lactobacillus sakei subsp. sakei 23K

Type Regulator Effector Pathway Genes Sites
TF AguR Agmatine utilization 1 1
TF ArgR Arginine Arginine degradation; Arginine biosynthesis 3 11
TF CcpA HPr, phosphocarrier protein; Fructose-1,6-bisphosphate Carbon catabolism 33 49
TF CcpB unknown 1 1
TF CcpN Gluconeogenesis 2 2
TF CggR Fructose-1,6-bisphosphate Glycolysis 1 1
TF CtsR Heat shock Heat shock response 3 3
TF DeoR Deoxyribose-5-phosphate Deoxynucleoside utilization 1 1
TF ExuR Galacturonate; Glucuronate Glucuronate utilization; Galacturonate utilization 1 1
TF FlpA Oxygen Heavy metal resistance 1 1
TF FlrR Drug resistance 2 2
TF FruR Fructose-6-phosphate Fructose utilization 1 4
TF GalR Galactose Galactosides utilization; Galactose utilization 3 5
TF GlnR Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 1 1
TF GntR1 Gluconate Gluconate utilization 2 2
TF HrcA Heat shock Heat shock response 3 3
TF LexA DNA damage SOS response 6 8
TF MleR L-malate Malate utilization 2 2
TF MntR Manganese ion, (Mn2+) Manganese homeostasis 3 3
TF NagR N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 4 5
TF NihR Nickel homeostasis 4 4
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 3 5
TF PadR p-Coumaric acid; Ferulic acid Phenolic acid stress response 1 1
TF PerR Iron ion, (Fe2+); Manganese ion, (Mn2+); Hydrogen peroxide Manganese homeostasis; Oxidative stress response; Iron homeostasis 4 4
TF PurR 5-phosphoribosyl 1-pyrophosphate Purine metabolism 10 21
TF RbsR Ribose Ribose utilization 1 2
TF Rex NADH Energy metabolism 7 10
TF ScrR Sucrose-6-phosphate Sucrose utilization 2 4
TF SdaR D-glycerate Glycerate utilization 1 1
TF TreR Trehalose-6-phosphate Trehalose utilization 2 2
TF YtrA Hypothetical ABC transporter 1 1
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 1 1