Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GalR regulog to Lactobacillus sakei subsp. sakei 23K

Reference regulog properties
Source regulog: GalR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Galactosides utilization; Galactose utilization
Effector: Galactose
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus sakei subsp. sakei 23K
Orthologous TF(s) LSA0763
Regulated genes 3
Built upon 30 sites [see more]
Predicted regulatory interactions in Lactobacillus sakei subsp. sakei 23K
Locus tag Position Score Sequence
Position: -122
Score: 5.2
Sequence: TACATTTTAGTAAAAGTTT
Position: -111
Score: 5.5
Sequence: AAAAGTTTAGTAAAATGAA
Locus tag: LSA0184
LSA0184 -122 5.2 TACATTTTAGTAAAAGTTT
-111 5.5 AAAAGTTTAGTAAAATGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: LVIS_1906
Ortholog function: Conserved hypothetical protein
Lactobacillus brevis ATCC 367 LVIS_1906 -222 5.1 ATTGATTTACTAAATTTTT
Lactobacillus sakei subsp. sakei 23K LSA0184 -111 5.5 AAAAGTTTAGTAAAATGAA
Oenococcus oeni PSU-1 OEOE_0306 -231 5.5 AATATTTTAGTAAAGATTT
Position: -101
Score: 5.4
Sequence: AAACATTTACTAAAAAATC
Locus tag: LSA0763
LSA0763 -101 5.4 AAACATTTACTAAAAAATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: galR
Ortholog function: Galactose utilization transcriptional regulator GalR, LacI family
Lactobacillus sakei subsp. sakei 23K LSA0763 -101 5.4 AAACATTTACTAAAAAATC
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0380 -89 5.9 TAAAATTTACTAAAAATAT
Position: -45
Score: 5.5
Sequence: AAATGTTTAGTAAAATGAA
Locus tag: LSA0764
LSA0764 -45 5.5 AAATGTTTAGTAAAATGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: galK
Ortholog function: Galactokinase (EC 2.7.1.6)
Lactobacillus sakei subsp. sakei 23K LSA0764 -45 5.5 AAATGTTTAGTAAAATGAA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0381 -101 5.8 ATATTTTTAGTAAATTTTA
-79 5.5 AAAAGTTTACTAAAAAGTA