Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of RbsR regulog to Lactobacillus sakei subsp. sakei 23K

Reference regulog properties
Source regulog: RbsR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Ribose utilization
Effector: Ribose
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus sakei subsp. sakei 23K
Orthologous TF(s) LSA0203
Regulated genes 1
Built upon 18 sites [see more]
Predicted regulatory interactions in Lactobacillus sakei subsp. sakei 23K
Locus tag Position Score Sequence
Position: -49
Score: 6.9
Sequence: TTAGTAAAACGTTTTACTAA
Locus tag: LSA0200
LSA0200 -49 6.9 TTAGTAAAACGTTTTACTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rbsU
Ortholog function: Putative ribose uptake protein RbsU, GRP transporter family (TC 2.A.7.5)
Lactobacillus plantarum WCFS1 lp_3658 -74 6.2 TTATTAAAACGTTTTCATAA
-61 6.1 TTCATAAAACGTTTTAATAA
Lactobacillus sakei subsp. sakei 23K LSA0200 -49 6.9 TTAGTAAAACGTTTTACTAA
Pediococcus pentosaceus ATCC 25745 PEPE_1697 -67 5.6 CTATTAAAACGTTTTCATAA
-54 5.3 TTCATAAAACGTTTTAAACA