Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NrdR regulog to Lactobacillus brevis ATCC 367

Reference regulog properties
Source regulog: NrdR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus brevis ATCC 367
Orthologous TF(s) LVIS_1039
Regulated genes 5
Built upon 81 sites [see more]
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

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© 2009-2020 RegPrecise
Predicted regulatory interactions in Lactobacillus brevis ATCC 367
Locus tag Position Score Sequence
Position: -82
Score: 5.8
Sequence: CCACAATATATTGTGT
Locus tag: LVIS_0311
LVIS_0311 -82 5.8 CCACAATATATTGTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pnuN
Ortholog function: NrdR-regulated deoxyribonucleotide transporter, PnuC-like
Lactobacillus acidophilus NCFM LBA1653 -53 5.5 GCACAATATATAGTAT
Lactobacillus brevis ATCC 367 LVIS_0311 -82 5.8 CCACAATATATTGTGT
-41 3.5 GTACTAAATATAGAAA
Lactobacillus casei ATCC 334 LSEI_1204 -107 4.9 CACCAATATATTGTAT
-105 3.6 CCAATATATTGTATAT
Lactobacillus helveticus DPC 4571 lhv_1757 -172 3.7 ACACAACATATAGATA
-140 4.5 GCACAATATTTTGTAA
-50 4.9 ACACAAAATGTTGTAT
Lactobacillus johnsonii NCC 533 LJ0643 -46 5.7 GCACAATATATTGTGT
Lactobacillus plantarum WCFS1 lp_0259 -108 5.7 ATACAATATATTGTGT
-78 4.8 ACACTACATGTAGTAG
Lactobacillus reuteri JCM 1112 LAR_1670 -72 5.6 CCACAATATCTTGTGT
-30 4.9 GCACAACATATAGTAG
Lactobacillus rhamnosus GG LGG_01221 -139 3.9 TTAGTACATGTTGTGG
-107 4.9 CACCAATATATTGTAT
Lactobacillus sakei subsp. sakei 23K LSA1189 -155 4.2 CTACCATATTTTGAAT
-105 5.4 GTACTATATATAGTGT
Position: -126
Score: 4.5
Sequence: ACACCATATTTGGTAG
Position: -94
Score: 4.6
Sequence: CTACCAAATATGGTGT
Locus tag: LVIS_0597
LVIS_0597 -126 4.5 ACACCATATTTGGTAG
-94 4.6 CTACCAAATATGGTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrdH
Ortholog function: Glutaredoxin-like protein NrdH
Lactobacillus brevis ATCC 367 LVIS_0597 -126 4.5 ACACCATATTTGGTAG
-94 4.6 CTACCAAATATGGTGT
Lactobacillus casei ATCC 334 LSEI_1467 -85 4.6 CCCCAAGATATGGTAT
Lactobacillus rhamnosus GG LGG_01473 -85 4.6 CCCCAAGATATGGTGT
Lactobacillus sakei subsp. sakei 23K LSA0942 -89 5 CTACCATATCTGGTAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1230 -84 5.5 CCACAATATATGGTGT
-51 4.9 TCTCTATATATTGTAT
Position: -39
Score: 5.7
Sequence: ACACTATATCTTGTAT
Locus tag: LVIS_1520
LVIS_1520 -39 5.7 ACACTATATCTTGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dgk2
Ortholog function: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
Lactobacillus brevis ATCC 367 LVIS_1520 -41 3.6 GTACACTATATCTTGT
-39 5.7 ACACTATATCTTGTAT
Lactobacillus plantarum WCFS1 lp_1329 -72 3.9 AAAGTCTATATGGTAT
-40 5.1 ATACAATATATTGTGC
Lactobacillus reuteri JCM 1112 LAR_1221 -88 4.4 CCACCAAATATTGTAA
-56 5 CCACAATATTTTGTAG
Pediococcus pentosaceus ATCC 25745 PEPE_0650 -83 5.2 ATACAATATGTTGTGG
Position: -100
Score: 4.8
Sequence: CCACGATATATTGTCT
Position: -68
Score: 4.9
Sequence: GTACAATATGTGGTGT
Locus tag: LVIS_1711
LVIS_1711 -100 4.8 CCACGATATATTGTCT
-68 4.9 GTACAATATGTGGTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dgk1
Ortholog function: Deoxyadenosine kinase (EC 2.7.1.76) / Deoxyguanosine kinase (EC 2.7.1.113)
Lactobacillus brevis ATCC 367 LVIS_1711 -100 4.8 CCACGATATATTGTCT
-68 4.9 GTACAATATGTGGTGT
Lactobacillus plantarum WCFS1 lp_1011 -99 4.4 TCACCAGATATTGCAT
-67 5 GTACAATATGTAGTGT
Pediococcus pentosaceus ATCC 25745 PEPE_1437 -77 4.1 TTTCAAGATATTGTTT
-46 4.4 GTACAATATGTAGTGC
Position: -77
Score: 5.3
Sequence: TAACTATATATTGTAT
Locus tag: LVIS_1898
LVIS_1898 -77 5.3 TAACTATATATTGTAT
Supported by regulated orthologs from reference regulons