Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of CopR regulog to Lactobacillus casei ATCC 334

Reference regulog properties
Source regulog: CopR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: CopY
Regulation mode: repressor
Biological process: Copper homeostasis
Effector: Copper ion, (Cu2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus casei ATCC 334
Orthologous TF(s) LSEI_A02, LSEI_1745
Regulated genes 2
Built upon 34 sites [see more]
Predicted regulatory interactions in Lactobacillus casei ATCC 334
Locus tag Position Score Sequence
Position: -77
Score: 5.4
Sequence: GTGACTACAGTTGTAAACTA
Locus tag: LSEI_A02
LSEI_A02 -77 5.4 GTGACTACAGTTGTAAACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: copR
Ortholog function: Copper transport transcriptional regulator CopR, CopY family
Lactobacillus casei ATCC 334 LSEI_A02 -77 5.4 GTGACTACAGTTGTAAACTA
-46 4.6 GAGACTACAAACGTAAACTT
Position: -29
Score: 6.1
Sequence: TAGATTACAGATGTAAACGG
Locus tag: LSEI_1745
LSEI_1745 -29 6.1 TAGATTACAGATGTAAACGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: copR
Ortholog function: Copper transport transcriptional regulator CopR, CopY family
Lactobacillus brevis ATCC 367 LVIS_0270 -68 5.4 ATGACTACAGATGTAGACTC
-35 6 AAGATTACATTTGTAGTCTA
Lactobacillus casei ATCC 334 LSEI_1745 -59 5 TGGTTTACAGTTGTAAATTA
-29 6.1 TAGATTACAGATGTAAACGG
Lactobacillus plantarum WCFS1 lp_3365 -52 5.2 ACGTTTACGGTTGTAAACTA
Lactobacillus rhamnosus GG LGG_01802 -59 5 TCGTTTACAGTTGTAAATTA
-29 6.2 AAGATTACAAGTGTAAACGG
Pediococcus pentosaceus ATCC 25745 PEPE_1646 -61 6.1 AAGTTTACAAATGTAGTCTA
-35 5.9 AAGATTACATTTGTAAACAG
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