Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagated regulons of Lactobacillus casei ATCC 334

Type Regulator Effector Pathway Genes Sites
TF ArgR Arginine Arginine degradation; Arginine biosynthesis 4 14
TF CcpA HPr, phosphocarrier protein; Fructose-1,6-bisphosphate Carbon catabolism 38 53
TF CcpB unknown 1 1
TF CcpN Gluconeogenesis 1 1
TF CggR Fructose-1,6-bisphosphate Glycolysis 1 1
TF CopR Copper ion, (Cu2+) Copper homeostasis 2 4
TF CtsR Heat shock Heat shock response 1 1
TF FabT Long-chain acyl-ACP Fatty acid biosynthesis 1 1
TF FatR Oleate; Gamma-linolenic acid; Linoleate; Phytanate Toxic fatty acid stress response 1 1
TF FruR Fructose-6-phosphate Fructose utilization 1 2
TF GalR Galactose Galactosides utilization; Galactose utilization 1 2
TF GlnR Phosphorylated NtrB, signal histidine kinase Nitrogen assimilation 4 5
TF GntR1 Gluconate Gluconate utilization 2 2
TF GutR HPr, phosphocarrier protein; GutB, sorbitol-specific PTS EIIB component Sorbitol utilization 1 1
TF HrcA Heat shock Heat shock response 6 6
TF LacR D-galactose-6-phosphate Lactose utilization 1 1
TF LBA1638 Transport 1 1
TF LexA DNA damage SOS response 9 12
TF Lp_3221 Sugar utilization 2 2
TF LSEI_0081 Transport 2 2
TF LSEI_0368 Sugar utilization 2 2
TF MdxR Maltose Maltose utilization; Maltodextrin utilization 2 2
TF MleR L-malate Malate utilization 1 1
TF MntR Manganese ion, (Mn2+) Manganese homeostasis 2 2
TF MtlR HPr, phosphocarrier protein; MtlA, mannitol-specific enzyme IICB PTS component Mannitol utilization 1 1
TF NagR N-acetylglucosamine-6-phosphate N-acetylglucosamine utilization 3 5
TF NiaR Niacin NAD biosynthesis 1 1
TF NrdR Deoxyribonucleotides Deoxyribonucleotide biosynthesis 5 7
TF NrtR Adenosine diphosphate ribose NAD biosynthesis 1 1
TF OglR2 Oligoglucoside utilization 1 1
TF PerR Iron ion, (Fe2+); Manganese ion, (Mn2+); Hydrogen peroxide Manganese homeostasis; Oxidative stress response; Iron homeostasis 5 6
TF PurR 5-phosphoribosyl 1-pyrophosphate Purine metabolism 7 21
TF RbsR Ribose Ribose utilization 1 1
TF RpiR Sugar utilization 2 2
TF Rex NADH Energy metabolism 3 6
TF TagR Tagatose-6-phosphate Tagatose utilization 2 2
TF TreR Trehalose-6-phosphate Trehalose utilization 1 1
TF YtrA Hypothetical ABC transporter 1 1
TF YxeR Antibiotic resistance 2 4
TF Zur Zinc ion, (Zn2+) Zinc homeostasis 4 6
© 2009-2020 RegPrecise