Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of CcpN regulog to Lactobacillus casei ATCC 334

Reference regulog properties
Source regulog: CcpN - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: CcpN
Regulation mode: repressor
Biological process: Gluconeogenesis
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus casei ATCC 334
Orthologous TF(s) LSEI_2335
Regulated genes 1
Built upon 6 sites [see more]
Predicted regulatory interactions in Lactobacillus casei ATCC 334
Locus tag Position Score Sequence
Position: -66
Score: 5
Sequence: TTCAAAAATAATACATTATAA
Locus tag: LSEI_2334
LSEI_2334 -66 5 TTCAAAAATAATACATTATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ppdK
Ortholog function: Pyruvate phosphate dikinase (EC 2.7.9.1)
Lactobacillus casei ATCC 334 LSEI_2334 -196 4.7 TTTTTAAATATCTCATTGAAA
-66 5 TTCAAAAATAATACATTATAA
Lactobacillus rhamnosus GG LGG_02351 -66 4.7 CTGCTAAATAATACATTATAT
Lactobacillus sakei subsp. sakei 23K LSA1141 -55 5.4 TTGTAATGTGACACACTATAT
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