Propagation of PurR regulog to Leuconostoc citreum KM20
| Source regulog: | PurR - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | PurR |
| Regulation mode: | repressor |
| Biological process: | Purine metabolism |
| Effector: | 5-phosphoribosyl 1-pyrophosphate |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Leuconostoc citreum KM20 |
| Orthologous TF(s) | LCK_01352 |
| Regulated genes | 7 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -147
Score: 4.8 Sequence: ATAAACGAACGAT
Position: -106
Score: 4.2 Sequence: AAAAGCGAAGCAT
Position: -23
Score: 5.3 Sequence: AAAAGCGAACAAT
Locus tag: LCK_00602
|
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| LCK_00602 | -147 | 4.8 | ATAAACGAACGAT | |
| -106 | 4.2 | AAAAGCGAAGCAT | ||
| -23 | 5.3 | AAAAGCGAACAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: purE | ||||
| Ortholog function: Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21) | ||||
| Lactobacillus acidophilus NCFM | LBA1561 | -59 | 4.4 | ATATAAGAACAAT |
| Lactobacillus casei ATCC 334 | LSEI_1756 | -107 | 5.3 | AAACACGAACGAT |
| Lactobacillus fermentum IFO 3956 | LAF_0118 | -106 | 5.2 | AAATCCGAACAAT |
| Lactobacillus helveticus DPC 4571 | lhv_1534 | -73 | 4.1 | AAATACAAACAAA |
| Lactobacillus plantarum WCFS1 | lp_2729 | -104 | 5 | TAACACGAACATT |
| Lactobacillus reuteri JCM 1112 | LAR_0128 | -102 | 4.9 | ATACACGAACTAT |
| Lactobacillus rhamnosus GG | LGG_01814 | -108 | 5.5 | AAATACGAACATT |
| -96 | 4.3 | TAAAACGAATAAT | ||
| Lactobacillus sakei subsp. sakei 23K | LSA0652 | -112 | 4.3 | TAACACGTACAAT |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0515 | -68 | 4.1 | AAATTCGAATTTT |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0718 | -137 | 4.1 | ATATACGAACTCT |
| Oenococcus oeni PSU-1 | OEOE_1138 | -130 | 4.6 | AAACACGAAATAT |
| -79 | 5.3 | AAAAACGAACGTT | ||
| Pediococcus pentosaceus ATCC 25745 | PEPE_1467 | -123 | 5.4 | AAAAACGAACTTT |
|
Position: 19
Score: 3.6 Sequence: AAGGGCAAACAAT
Position: 34
Score: 4 Sequence: AAAAGCAAGCATT
Locus tag: LCK_00604
|
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| LCK_00604 | 19 | 3.6 | AAGGGCAAACAAT | |
| 34 | 4 | AAAAGCAAGCATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: purC | ||||
| Ortholog function: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) | ||||
| Lactobacillus acidophilus NCFM | LBA1559 | -151 | 5.3 | AAACACGAACGAT |
| Lactobacillus casei ATCC 334 | LSEI_1754 | -107 | 5.3 | AAACACGAACGAT |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | LBUL_1338 | -60 | 3.4 | AATTACGAATAGT |
| Lactobacillus fermentum IFO 3956 | LAF_0124 | -155 | 5.6 | AAACACGAACATT |
| Lactobacillus plantarum WCFS1 | lp_2727 | -104 | 5 | TAACACGAACATT |
| Lactobacillus reuteri JCM 1112 | LAR_0131 | -153 | 5.6 | AAACACGAACAAT |
| Lactobacillus rhamnosus GG | LGG_01812 | -108 | 5.5 | AAATACGAACATT |
| -96 | 4.3 | TAAAACGAATAAT | ||
| Lactobacillus sakei subsp. sakei 23K | LSA0655 | -110 | 4.9 | ATAAACGAACTTT |
| -58 | 5.6 | AAAAACGAACAAT | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0663 | -27 | 5.2 | AAAGACGAACAAT |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0720 | -137 | 4.1 | ATATACGAACTCT |
| Oenococcus oeni PSU-1 | OEOE_1136 | -130 | 4.6 | AAACACGAAATAT |
| -79 | 5.3 | AAAAACGAACGTT | ||
| Pediococcus pentosaceus ATCC 25745 | PEPE_1465 | -123 | 5.4 | AAAAACGAACTTT |
|
Position: 22
Score: 3.6 Sequence: AAAAGCAAGCGAT
Locus tag: LCK_00608
|
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| LCK_00608 | 22 | 3.6 | AAAAGCAAGCGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: purF | ||||
| Ortholog function: Amidophosphoribosyltransferase (EC 2.4.2.14) | ||||
| Lactobacillus acidophilus NCFM | LBA1555 | -151 | 5.3 | AAACACGAACGAT |
| Lactobacillus casei ATCC 334 | LSEI_1750 | -107 | 5.3 | AAACACGAACGAT |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | LBUL_1334 | -60 | 3.4 | AATTACGAATAGT |
| Lactobacillus fermentum IFO 3956 | LAF_0128 | -155 | 5.6 | AAACACGAACATT |
| Lactobacillus plantarum WCFS1 | lp_2723 | -104 | 5 | TAACACGAACATT |
| Lactobacillus reuteri JCM 1112 | LAR_0135 | -153 | 5.6 | AAACACGAACAAT |
| Lactobacillus rhamnosus GG | LGG_01808 | -108 | 5.5 | AAATACGAACATT |
| -96 | 4.3 | TAAAACGAATAAT | ||
| Lactobacillus sakei subsp. sakei 23K | LSA0659 | -110 | 4.9 | ATAAACGAACTTT |
| -58 | 5.6 | AAAAACGAACAAT | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0667 | -27 | 5.2 | AAAGACGAACAAT |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0724 | -137 | 4.1 | ATATACGAACTCT |
| Pediococcus pentosaceus ATCC 25745 | PEPE_1461 | -123 | 5.4 | AAAAACGAACTTT |
|
Position: -166
Score: 4.6 Sequence: AAATACAAACGTT
Position: -77
Score: 3.6 Sequence: ATATACGAACACA
Position: -24
Score: 5 Sequence: TAAAACGAACATT
Locus tag: LCK_00613
|
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| LCK_00613 | -166 | 4.6 | AAATACAAACGTT | |
| -77 | 3.6 | ATATACGAACACA | ||
| -24 | 5 | TAAAACGAACATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: purD | ||||
| Ortholog function: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) | ||||
| Lactobacillus acidophilus NCFM | LBA1551 | -151 | 5.3 | AAACACGAACGAT |
| Lactobacillus casei ATCC 334 | LSEI_1746 | -107 | 5.3 | AAACACGAACGAT |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | LBUL_1330 | -60 | 3.4 | AATTACGAATAGT |
| Lactobacillus plantarum WCFS1 | lp_2719 | -104 | 5 | TAACACGAACATT |
| Lactobacillus reuteri JCM 1112 | LAR_0139 | -153 | 5.6 | AAACACGAACAAT |
| Lactobacillus rhamnosus GG | LGG_01803 | -108 | 5.5 | AAATACGAACATT |
| -96 | 4.3 | TAAAACGAATAAT | ||
| Lactobacillus sakei subsp. sakei 23K | LSA0663 | -110 | 4.9 | ATAAACGAACTTT |
| -58 | 5.6 | AAAAACGAACAAT | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0671 | -27 | 5.2 | AAAGACGAACAAT |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0700 | -106 | 5.3 | AAAAACGAACTAT |
| Pediococcus pentosaceus ATCC 25745 | PEPE_1457 | -123 | 5.4 | AAAAACGAACTTT |
|
Position: -111
Score: 4.1 Sequence: AAAAACGGAGTTT
Locus tag: LCK_00618
|
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| LCK_00618 | -111 | 4.1 | AAAAACGGAGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: purB | ||||
| Ortholog function: Adenylosuccinate lyase (EC 4.3.2.2) | ||||
| Lactobacillus acidophilus NCFM | LBA1891 | -123 | 4.9 | AAAATCGAACTAT |
| Lactobacillus brevis ATCC 367 | LVIS_0228 | -190 | 5 | AAAAGCGAACTAT |
| Lactobacillus fermentum IFO 3956 | LAF_0120 | -106 | 5.2 | AAATCCGAACAAT |
| Lactobacillus helveticus DPC 4571 | lhv_2029 | -134 | 4.9 | AAAATCGAACTAT |
| Lactobacillus johnsonii NCC 533 | LJ0443 | -120 | 4.3 | AAAAATGAATATT |
| Lactobacillus plantarum WCFS1 | lp_3269 | -201 | 4.3 | AAAACCGAATGTT |
| Lactobacillus reuteri JCM 1112 | LAR_0130 | -102 | 4.9 | ATACACGAACTAT |
| Lactobacillus sakei subsp. sakei 23K | LSA0654 | -112 | 4.3 | TAACACGTACAAT |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0517 | -68 | 4.1 | AAATTCGAATTTT |