Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PurR regulog to Leuconostoc citreum KM20

Reference regulog properties
Source regulog: PurR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: PurR
Regulation mode: repressor
Biological process: Purine metabolism
Effector: 5-phosphoribosyl 1-pyrophosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Leuconostoc citreum KM20
Orthologous TF(s) LCK_01352
Regulated genes 7
Built upon 76 sites [see more]
Predicted regulatory interactions in Leuconostoc citreum KM20
Locus tag Position Score Sequence
Position: -147
Score: 4.8
Sequence: ATAAACGAACGAT
Position: -106
Score: 4.2
Sequence: AAAAGCGAAGCAT
Position: -23
Score: 5.3
Sequence: AAAAGCGAACAAT
Locus tag: LCK_00602
LCK_00602 -147 4.8 ATAAACGAACGAT
-106 4.2 AAAAGCGAAGCAT
-23 5.3 AAAAGCGAACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purE
Ortholog function: Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Lactobacillus acidophilus NCFM LBA1561 -59 4.4 ATATAAGAACAAT
Lactobacillus casei ATCC 334 LSEI_1756 -107 5.3 AAACACGAACGAT
Lactobacillus fermentum IFO 3956 LAF_0118 -106 5.2 AAATCCGAACAAT
Lactobacillus helveticus DPC 4571 lhv_1534 -73 4.1 AAATACAAACAAA
Lactobacillus plantarum WCFS1 lp_2729 -104 5 TAACACGAACATT
Lactobacillus reuteri JCM 1112 LAR_0128 -102 4.9 ATACACGAACTAT
Lactobacillus rhamnosus GG LGG_01814 -108 5.5 AAATACGAACATT
-96 4.3 TAAAACGAATAAT
Lactobacillus sakei subsp. sakei 23K LSA0652 -112 4.3 TAACACGTACAAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0515 -68 4.1 AAATTCGAATTTT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0718 -137 4.1 ATATACGAACTCT
Oenococcus oeni PSU-1 OEOE_1138 -130 4.6 AAACACGAAATAT
-79 5.3 AAAAACGAACGTT
Pediococcus pentosaceus ATCC 25745 PEPE_1467 -123 5.4 AAAAACGAACTTT
Position: 19
Score: 3.6
Sequence: AAGGGCAAACAAT
Position: 34
Score: 4
Sequence: AAAAGCAAGCATT
Locus tag: LCK_00604
LCK_00604 19 3.6 AAGGGCAAACAAT
34 4 AAAAGCAAGCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purC
Ortholog function: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)
Lactobacillus acidophilus NCFM LBA1559 -151 5.3 AAACACGAACGAT
Lactobacillus casei ATCC 334 LSEI_1754 -107 5.3 AAACACGAACGAT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_1338 -60 3.4 AATTACGAATAGT
Lactobacillus fermentum IFO 3956 LAF_0124 -155 5.6 AAACACGAACATT
Lactobacillus plantarum WCFS1 lp_2727 -104 5 TAACACGAACATT
Lactobacillus reuteri JCM 1112 LAR_0131 -153 5.6 AAACACGAACAAT
Lactobacillus rhamnosus GG LGG_01812 -108 5.5 AAATACGAACATT
-96 4.3 TAAAACGAATAAT
Lactobacillus sakei subsp. sakei 23K LSA0655 -110 4.9 ATAAACGAACTTT
-58 5.6 AAAAACGAACAAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0663 -27 5.2 AAAGACGAACAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0720 -137 4.1 ATATACGAACTCT
Oenococcus oeni PSU-1 OEOE_1136 -130 4.6 AAACACGAAATAT
-79 5.3 AAAAACGAACGTT
Pediococcus pentosaceus ATCC 25745 PEPE_1465 -123 5.4 AAAAACGAACTTT
Position: 22
Score: 3.6
Sequence: AAAAGCAAGCGAT
Locus tag: LCK_00608
LCK_00608 22 3.6 AAAAGCAAGCGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purF
Ortholog function: Amidophosphoribosyltransferase (EC 2.4.2.14)
Lactobacillus acidophilus NCFM LBA1555 -151 5.3 AAACACGAACGAT
Lactobacillus casei ATCC 334 LSEI_1750 -107 5.3 AAACACGAACGAT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_1334 -60 3.4 AATTACGAATAGT
Lactobacillus fermentum IFO 3956 LAF_0128 -155 5.6 AAACACGAACATT
Lactobacillus plantarum WCFS1 lp_2723 -104 5 TAACACGAACATT
Lactobacillus reuteri JCM 1112 LAR_0135 -153 5.6 AAACACGAACAAT
Lactobacillus rhamnosus GG LGG_01808 -108 5.5 AAATACGAACATT
-96 4.3 TAAAACGAATAAT
Lactobacillus sakei subsp. sakei 23K LSA0659 -110 4.9 ATAAACGAACTTT
-58 5.6 AAAAACGAACAAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0667 -27 5.2 AAAGACGAACAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0724 -137 4.1 ATATACGAACTCT
Pediococcus pentosaceus ATCC 25745 PEPE_1461 -123 5.4 AAAAACGAACTTT
Position: -166
Score: 4.6
Sequence: AAATACAAACGTT
Position: -77
Score: 3.6
Sequence: ATATACGAACACA
Position: -24
Score: 5
Sequence: TAAAACGAACATT
Locus tag: LCK_00613
LCK_00613 -166 4.6 AAATACAAACGTT
-77 3.6 ATATACGAACACA
-24 5 TAAAACGAACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purD
Ortholog function: Phosphoribosylamine--glycine ligase (EC 6.3.4.13)
Lactobacillus acidophilus NCFM LBA1551 -151 5.3 AAACACGAACGAT
Lactobacillus casei ATCC 334 LSEI_1746 -107 5.3 AAACACGAACGAT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_1330 -60 3.4 AATTACGAATAGT
Lactobacillus plantarum WCFS1 lp_2719 -104 5 TAACACGAACATT
Lactobacillus reuteri JCM 1112 LAR_0139 -153 5.6 AAACACGAACAAT
Lactobacillus rhamnosus GG LGG_01803 -108 5.5 AAATACGAACATT
-96 4.3 TAAAACGAATAAT
Lactobacillus sakei subsp. sakei 23K LSA0663 -110 4.9 ATAAACGAACTTT
-58 5.6 AAAAACGAACAAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0671 -27 5.2 AAAGACGAACAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0700 -106 5.3 AAAAACGAACTAT
Pediococcus pentosaceus ATCC 25745 PEPE_1457 -123 5.4 AAAAACGAACTTT
Position: -111
Score: 4.1
Sequence: AAAAACGGAGTTT
Locus tag: LCK_00618
LCK_00618 -111 4.1 AAAAACGGAGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purB
Ortholog function: Adenylosuccinate lyase (EC 4.3.2.2)
Lactobacillus acidophilus NCFM LBA1891 -123 4.9 AAAATCGAACTAT
Lactobacillus brevis ATCC 367 LVIS_0228 -190 5 AAAAGCGAACTAT
Lactobacillus fermentum IFO 3956 LAF_0120 -106 5.2 AAATCCGAACAAT
Lactobacillus helveticus DPC 4571 lhv_2029 -134 4.9 AAAATCGAACTAT
Lactobacillus johnsonii NCC 533 LJ0443 -120 4.3 AAAAATGAATATT
Lactobacillus plantarum WCFS1 lp_3269 -201 4.3 AAAACCGAATGTT
Lactobacillus reuteri JCM 1112 LAR_0130 -102 4.9 ATACACGAACTAT
Lactobacillus sakei subsp. sakei 23K LSA0654 -112 4.3 TAACACGTACAAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0517 -68 4.1 AAATTCGAATTTT