Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CopR regulog to Lactobacillus rhamnosus GG

Reference regulog properties
Source regulog: CopR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: CopY
Regulation mode: repressor
Biological process: Copper homeostasis
Effector: Copper ion, (Cu2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus rhamnosus GG
Orthologous TF(s) LGG_01802
Regulated genes 1
Built upon 34 sites [see more]
Predicted regulatory interactions in Lactobacillus rhamnosus GG
Locus tag Position Score Sequence
Position: -29
Score: 6.2
Sequence: AAGATTACAAGTGTAAACGG
Locus tag: LGG_01802
LGG_01802 -29 6.2 AAGATTACAAGTGTAAACGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: copR
Ortholog function: Copper transport transcriptional regulator CopR, CopY family
Lactobacillus brevis ATCC 367 LVIS_0270 -68 5.4 ATGACTACAGATGTAGACTC
-35 6 AAGATTACATTTGTAGTCTA
Lactobacillus casei ATCC 334 LSEI_1745 -59 5 TGGTTTACAGTTGTAAATTA
-29 6.1 TAGATTACAGATGTAAACGG
Lactobacillus plantarum WCFS1 lp_3365 -52 5.2 ACGTTTACGGTTGTAAACTA
Lactobacillus rhamnosus GG LGG_01802 -59 5 TCGTTTACAGTTGTAAATTA
-29 6.2 AAGATTACAAGTGTAAACGG
Pediococcus pentosaceus ATCC 25745 PEPE_1646 -61 6.1 AAGTTTACAAATGTAGTCTA
-35 5.9 AAGATTACATTTGTAAACAG
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