Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PurR regulog to Lactobacillus brevis ATCC 367

Reference regulog properties
Source regulog: PurR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: PurR
Regulation mode: repressor
Biological process: Purine metabolism
Effector: 5-phosphoribosyl 1-pyrophosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus brevis ATCC 367
Orthologous TF(s) LVIS_0474
Regulated genes 4
Built upon 76 sites [see more]
Predicted regulatory interactions in Lactobacillus brevis ATCC 367
Locus tag Position Score Sequence
Position: -247
Score: 5.3
Sequence: AAAAGCGAACATT
Locus tag: LVIS_0227
LVIS_0227 -247 5.3 AAAAGCGAACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purA
Ortholog function: Adenylosuccinate synthetase (EC 6.3.4.4)
Lactobacillus acidophilus NCFM LBA1892 -123 4.9 AAAATCGAACTAT
Lactobacillus brevis ATCC 367 LVIS_0227 -247 5.3 AAAAGCGAACATT
Lactobacillus fermentum IFO 3956 LAF_0044 -123 5.3 AAAACCGAACAAT
Lactobacillus helveticus DPC 4571 lhv_2030 -134 4.9 AAAATCGAACTAT
Lactobacillus johnsonii NCC 533 LJ0442 -120 4.3 AAAAATGAATATT
Lactobacillus plantarum WCFS1 lp_3270 -280 5.6 AAACACGAACATT
-239 4.5 AGAGACGAACAAT
-135 5.1 AAACAAGAACATT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1460 -132 4.2 AAAAAGCAACATT
Pediococcus pentosaceus ATCC 25745 PEPE_1247 -117 5.1 AAACACGAACCAT
Position: -190
Score: 5
Sequence: AAAAGCGAACTAT
Locus tag: LVIS_0228
LVIS_0228 -190 5 AAAAGCGAACTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purB
Ortholog function: Adenylosuccinate lyase (EC 4.3.2.2)
Lactobacillus acidophilus NCFM LBA1891 -123 4.9 AAAATCGAACTAT
Lactobacillus brevis ATCC 367 LVIS_0228 -190 5 AAAAGCGAACTAT
Lactobacillus fermentum IFO 3956 LAF_0120 -106 5.2 AAATCCGAACAAT
Lactobacillus helveticus DPC 4571 lhv_2029 -134 4.9 AAAATCGAACTAT
Lactobacillus johnsonii NCC 533 LJ0443 -120 4.3 AAAAATGAATATT
Lactobacillus plantarum WCFS1 lp_3269 -201 4.3 AAAACCGAATGTT
Lactobacillus reuteri JCM 1112 LAR_0130 -102 4.9 ATACACGAACTAT
Lactobacillus sakei subsp. sakei 23K LSA0654 -112 4.3 TAACACGTACAAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0517 -68 4.1 AAATTCGAATTTT
Position: -91
Score: 5.3
Sequence: AAACCCGAACAAT
Locus tag: LVIS_0474
LVIS_0474 -91 5.3 AAACCCGAACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purR
Ortholog function: Purine metabolism transcriptional regulator PurR, PurR family
Lactobacillus acidophilus NCFM LBA0218 -27 4.8 AAAACCAAACATT
Lactobacillus brevis ATCC 367 LVIS_0474 -91 5.3 AAACCCGAACAAT
Lactobacillus casei ATCC 334 LSEI_2587 -126 4.8 AAATGCGAACGTT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_0302 -54 4.3 AAAAACAGACATT
Lactobacillus fermentum IFO 3956 LAF_0194 -98 5.2 AAAGACGAACAAT
Lactobacillus helveticus DPC 4571 lhv_0234 -27 4.1 AAAGCCAAACGTT
Lactobacillus johnsonii NCC 533 LJ0207 -105 4.1 TATTACGAACAAT
Lactobacillus plantarum WCFS1 lp_0466 12 4.3 AGAAGCGAACGTT
Lactobacillus reuteri JCM 1112 LAR_0210 -64 5.2 AAATCCGAACATT
Lactobacillus rhamnosus GG LGG_02564 -126 4.8 AAATGCGAACGTT
Lactobacillus sakei subsp. sakei 23K LSA1651 -120 5.6 AAAAACGAACAAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0315 -116 5.4 AAAAACGAACTTT
Pediococcus pentosaceus ATCC 25745 PEPE_0292 -103 5.2 AAATCCGAACATT
Position: -66
Score: 5.6
Sequence: AAACACGAACAAT
Locus tag: LVIS_2274
LVIS_2274 -66 5.6 AAACACGAACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pbuG
Ortholog function: Guanine/hypoxanthine permease
Lactobacillus brevis ATCC 367 LVIS_2274 -66 5.6 AAACACGAACAAT
Lactobacillus fermentum IFO 3956 LAF_1806 -67 4.3 AAAGCCGAATATT
Lactobacillus plantarum WCFS1 lp_0848 -57 5.3 AAACACGAACGTT
Pediococcus pentosaceus ATCC 25745 PEPE_0303 -122 5.2 AAATACGAACTAT