Propagation of GntR1 regulog to Lactobacillus casei BL23
| Source regulog: | GntR1 - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | RpiR |
| Regulation mode: | |
| Biological process: | Gluconate utilization |
| Effector: | Gluconate |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Lactobacillus casei BL23 |
| Orthologous TF(s) | LCABL_12870, LCABL_02260 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -208
Score: 6 Sequence: TATGTAAATAGTTTACAAA
Position: -175
Score: 5.1 Sequence: ACCGTAAATTATTTTCACA
Locus tag: LCABL_02260
|
||||
| LCABL_02260 | -208 | 6 | TATGTAAATAGTTTACAAA | |
| -175 | 5.1 | ACCGTAAATTATTTTCACA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gntR1 | ||||
| Ortholog function: Gluconate utilization transcriptional regulator GntR1, RpiR family | ||||
| Lactobacillus casei ATCC 334 | LSEI_0226 | -208 | 5.7 | TATGTAAATCGTTTACAAA |
| -175 | 4.7 | ACCGTAAATTATTTTCACG | ||
| Lactobacillus rhamnosus GG | LGG_00273 | -96 | 5.8 | TATGTAAAATAATTACAAA |
| -63 | 5.4 | TTCGTAAATAATTTTCAAT | ||
| Lactobacillus sakei subsp. sakei 23K | LSA0296 | -70 | 5.2 | ATAGAAAATTATTTTCGTA |
| Pediococcus pentosaceus ATCC 25745 | PEPE_1363 | -101 | 5.8 | TATGAAAATATGTTACATA |
| -69 | 5.3 | CAAGAAAATTATTTTCTTA | ||
|
Position: -146
Score: 5.1 Sequence: TGTGAAAATAATTTACGGT
Position: -113
Score: 6 Sequence: TTTGTAAACTATTTACATA
Locus tag: LCABL_02270
|
||||
| LCABL_02270 | -146 | 5.1 | TGTGAAAATAATTTACGGT | |
| -113 | 6 | TTTGTAAACTATTTACATA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gntZ | ||||
| Ortholog function: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) | ||||
| Lactobacillus brevis ATCC 367 | LVIS_0144 | -106 | 4.8 | TTTGTAATTTTTTTACGGT |
| -75 | 6.3 | TATGTAAATTTTTTTCATA | ||
| Lactobacillus casei ATCC 334 | LSEI_0227 | -146 | 4.7 | CGTGAAAATAATTTACGGT |
| -113 | 5.7 | TTTGTAAACGATTTACATA | ||
| Lactobacillus plantarum WCFS1 | lp_1251 | -109 | 6 | AATGAAAATAATTTACAAA |
| -77 | 5.1 | TATGTAAATAGTTTTATTA | ||
| Lactobacillus rhamnosus GG | LGG_00274 | -238 | 5.4 | ATTGAAAATTATTTACGAA |
| -205 | 5.8 | TTTGTAATTATTTTACATA | ||
| Lactobacillus sakei subsp. sakei 23K | LSA0297 | -96 | 5.2 | TACGAAAATAATTTTCTAT |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0551 | -97 | 5.1 | TTAGAAAACAATTTTCAAT |
| -65 | 6.1 | TGTGTAAATTATTTTCATA | ||
| Oenococcus oeni PSU-1 | OEOE_1523 | -78 | 5.6 | TATGTAAATATTTTACACG |
| -46 | 5.4 | TGAGTAAAAAAATTACATA | ||
| Pediococcus pentosaceus ATCC 25745 | PEPE_1362 | -98 | 5.3 | TAAGAAAATAATTTTCTTG |
| -66 | 5.8 | TATGTAACATATTTTCATA | ||