Profile of regulator GntR1 in Lactobacillaceae
Properties
| Regulator family: |
RpiR |
| Regulation mode: |
|
| Biological process: |
Gluconate utilization |
| Effector: |
Gluconate |
| Regulog: |
GntR1 - Lactobacillaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Lactobacillus brevis ATCC 367
|
|
LVIS_1585 |
gntK |
-143 |
5.2 |
AGTGAAACTTTTTTACATA |
|
LVIS_1584 |
gntR1 |
-63 |
5.2 |
GTTGTAAAATGTTTACAAA |
|
LVIS_1584 |
gntR1 |
-95 |
5.2 |
TATGTAAAAAAGTTTCACT |
|
LVIS_0144 |
gntZ |
-75 |
6.3 |
TATGTAAATTTTTTTCATA |
|
LVIS_1585 |
gntK |
-175 |
5.2 |
TTTGTAAACATTTTACAAC |
|
LVIS_1576 |
gntP |
-131 |
4.6 |
TTTGAAAATAACATTCAAT |
|
LVIS_1576 |
gntP |
-99 |
5.7 |
CTTGAAAATATTTTTCATA |
|
LVIS_0144 |
gntZ |
-106 |
4.8 |
TTTGTAATTTTTTTACGGT |
|
Lactobacillus casei ATCC 334
|
|
LSEI_0226 |
gntR1 |
-208 |
5.7 |
TATGTAAATCGTTTACAAA |
|
LSEI_0226 |
gntR1 |
-175 |
4.7 |
ACCGTAAATTATTTTCACG |
|
LSEI_0227 |
gntZ |
-146 |
4.7 |
CGTGAAAATAATTTACGGT |
|
LSEI_0227 |
gntZ |
-113 |
5.7 |
TTTGTAAACGATTTACATA |
|
Lactobacillus plantarum WCFS1
|
|
lp_1251 |
gntZ |
-109 |
6 |
AATGAAAATAATTTACAAA |
|
lp_1251 |
gntZ |
-77 |
5.1 |
TATGTAAATAGTTTTATTA |
|
Lactobacillus rhamnosus GG
|
|
LGG_00273 |
gntR1 |
-96 |
5.8 |
TATGTAAAATAATTACAAA |
|
LGG_00273 |
gntR1 |
-63 |
5.4 |
TTCGTAAATAATTTTCAAT |
|
LGG_00274 |
gntZ |
-238 |
5.4 |
ATTGAAAATTATTTACGAA |
|
LGG_00274 |
gntZ |
-205 |
5.8 |
TTTGTAATTATTTTACATA |
|
Lactobacillus sakei subsp. sakei 23K
|
|
LSA0296 |
gntR1 |
-70 |
5.2 |
ATAGAAAATTATTTTCGTA |
|
LSA0297 |
gntZ |
-96 |
5.2 |
TACGAAAATAATTTTCTAT |
|
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
|
|
LEUM_0550 |
gntR1 |
-51 |
5.1 |
ATTGAAAATTGTTTTCTAA |
|
LEUM_0550 |
gntR1 |
-83 |
6.1 |
TATGAAAATAATTTACACA |
|
LEUM_0551 |
gntZ |
-97 |
5.1 |
TTAGAAAACAATTTTCAAT |
|
LEUM_0551 |
gntZ |
-65 |
6.1 |
TGTGTAAATTATTTTCATA |
|
Oenococcus oeni PSU-1
|
|
OEOE_1524 |
gntR1 |
-64 |
5.4 |
TATGTAATTTTTTTACTCA |
|
OEOE_1523 |
gntZ |
-78 |
5.6 |
TATGTAAATATTTTACACG |
|
OEOE_1523 |
gntZ |
-46 |
5.4 |
TGAGTAAAAAAATTACATA |
|
OEOE_1524 |
gntR1 |
-32 |
5.6 |
CGTGTAAAATATTTACATA |
|
Pediococcus pentosaceus ATCC 25745
|
|
PEPE_1363 |
gntR1 |
-101 |
5.8 |
TATGAAAATATGTTACATA |
|
PEPE_1363 |
gntR1 |
-69 |
5.3 |
CAAGAAAATTATTTTCTTA |
|
PEPE_1362 |
gntZ |
-98 |
5.3 |
TAAGAAAATAATTTTCTTG |
|
PEPE_1362 |
gntZ |
-66 |
5.8 |
TATGTAACATATTTTCATA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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