Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of XylR regulog to Leuconostoc citreum KM20

Reference regulog properties
Source regulog: XylR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: ROK
Regulation mode: repressor
Biological process: Xylose utilization
Effector: Xylose
Phylum: Firmicutes
Propagated regulon:
Target genome Leuconostoc citreum KM20
Orthologous TF(s) LCK_00074
Regulated genes 2
Built upon 15 sites [see more]
Predicted regulatory interactions in Leuconostoc citreum KM20
Locus tag Position Score Sequence
Position: -151
Score: 5.6
Sequence: GTTAGTTAGTTGCGCGAACAAAC
Position: -147
Score: 5.4
Sequence: GTTAGTTGCGCGAACAAACCAAC
Locus tag: LCK_00070
LCK_00070 -151 5.6 GTTAGTTAGTTGCGCGAACAAAC
-147 5.4 GTTAGTTGCGCGAACAAACCAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: xynT2
Ortholog function: Xyloside transporter XynT
Lactobacillus brevis ATCC 367 LVIS_2286 -90 5.1 GTTGGTTGCTTTCGACAACTAAT
Position: -70
Score: 5.7
Sequence: GTTGGTTGTTTAAACCGACCAAC
Locus tag: LCK_00075
LCK_00075 -70 5.7 GTTGGTTGTTTAAACCGACCAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: xylA
Ortholog function: Xylose isomerase (EC 5.3.1.5)
Lactobacillus brevis ATCC 367 LVIS_0183 -42 5.7 GTTGGTTGTCGCAACGAACTAAC
Lactobacillus fermentum IFO 3956 LAF_0402 -53 5.1 GTTAGTTGTTTTAAAAAACCAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0130 -59 5.8 GTTGGTTGGTGTAACCAACTATG
Pediococcus pentosaceus ATCC 25745 PEPE_0187 -66 5.1 GTTTGTAAATAGAACTAACAAAC
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