Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of FlpA regulog to Lactobacillus plantarum JDM1

Reference regulog properties
Source regulog: FlpA - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Heavy metal resistance
Effector: Oxygen
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus plantarum JDM1
Orthologous TF(s) JDM1_1204, JDM1_2744
Regulated genes 4
Built upon 32 sites [see more]
Predicted regulatory interactions in Lactobacillus plantarum JDM1
Locus tag Position Score Sequence
Position: -31
Score: 5.2
Sequence: AAATTGACATAGATCAAGAA
Locus tag: JDM1_1204
JDM1_1204 -31 5.2 AAATTGACATAGATCAAGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: flpA
Ortholog function: Heavy metal resistance transcriptional regulator FlpA, Crp family
Lactobacillus plantarum WCFS1 lp_1442 -31 5.3 AAATTGACATAAATCAAGAA
Position: -78
Score: 6.1
Sequence: AACTTGACGCCTATCAAGTT
Locus tag: JDM1_2737
JDM1_2737 -78 6.1 AACTTGACGCCTATCAAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cadA
Ortholog function: Lead, cadmium, zinc and mercury transporting ATPase (EC:3.6.3.-)
Lactobacillus acidophilus NCFM LBA0541 -75 5.4 ATCTTGATAACAGTCAAGTC
Lactobacillus casei ATCC 334 LSEI_0070 -68 4.8 AAGTTGATCACCGTCAAGGC
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_0427 -77 5.3 ATCTTGATAGAAATCAATTG
Lactobacillus fermentum IFO 3956 LAF_1702 -69 5.2 CTCTTGATTCCGATCAATTT
Lactobacillus johnsonii NCC 533 LJ1696 -75 5.2 ATCTTGATAATAGTCAAGTC
Lactobacillus plantarum WCFS1 lp_3435 -78 6.1 AACTTGACGCCTATCAAGTT
Lactobacillus rhamnosus GG LGG_00082 -68 5.3 AAATTGATCCCGGTCAAGGT
Lactobacillus sakei subsp. sakei 23K LSA1784 -75 6.3 AACTTGATGGCTATCAAGTT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1786 -210 5.6 AACTTGATAGCCATAAATTT
-88 5.7 AACTTGATGTCAGTCAATTA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_A03 -76 6.3 AACTTGATGGACGTCAAGTT
Pediococcus pentosaceus ATCC 25745 PEPE_0411 -75 5.7 AAATTGACCTACGTCAATTT
Position: -75
Score: 6
Sequence: TTCTTGACGGCCGTCAAGTT
Locus tag: JDM1_2743
JDM1_2743 -75 6 TTCTTGACGGCCGTCAAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: copZ
Ortholog function: Copper chaperone
Lactobacillus acidophilus NCFM LBA0542 -81 6 AAATTGACGATCATCAAGTT
Lactobacillus casei ATCC 334 LSEI_0071 -76 5.4 AACTTGACGACGATCAAGGA
Lactobacillus fermentum IFO 3956 LAF_1701 -68 5.1 AAGTTGATGAGGATCAATTA
Lactobacillus johnsonii NCC 533 LJ1695 -82 6 AAATTGACGATCATCAAGTT
Lactobacillus plantarum WCFS1 lp_3442 -75 6 TTCTTGACGGCCGTCAAGTT
Lactobacillus reuteri JCM 1112 LAR_1340 -69 5.7 AAATTGATGATAATCAATTT
Lactobacillus rhamnosus GG LGG_00083 -76 6 AACTTGACGGCCATCAAGGT
Lactobacillus sakei subsp. sakei 23K LSA1783 -79 6.1 AACTTGATGGCGATCAATTT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1784 -129 5.9 AACTTGATATGCGTCAATTT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_A04 -66 5.2 TAATTGATCTATATCAAGTA
Oenococcus oeni PSU-1 OEOE_0354 -126 6 TTCTTGACGGCCGTCAAGTT
Pediococcus pentosaceus ATCC 25745 PEPE_0409 -75 5.7 AAATTGACCTACGTCAATTT
Position: -142
Score: 6
Sequence: AACTTGACGGCCGTCAAGAA
Locus tag: JDM1_2744
JDM1_2744 -142 6 AACTTGACGGCCGTCAAGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: flpA
Ortholog function: Heavy metal resistance transcriptional regulator FlpA, Crp family
Lactobacillus plantarum WCFS1 lp_3444 -142 6 AACTTGACGGCCGTCAAGAA
Oenococcus oeni PSU-1 OEOE_0355 -142 6 AACTTGACGGCCGTCAAGAA
Pediococcus pentosaceus ATCC 25745 PEPE_0408 -74 5.7 AAATTGACGTAGGTCAATTT
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