Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of FlpA regulog to Lactobacillus salivarius subsp. salivarius UCC118

Reference regulog properties
Source regulog: FlpA - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Heavy metal resistance
Effector: Oxygen
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus salivarius subsp. salivarius UCC118
Orthologous TF(s) LSL_1782
Regulated genes 4
Built upon 32 sites [see more]
Predicted regulatory interactions in Lactobacillus salivarius subsp. salivarius UCC118
Locus tag Position Score Sequence
Position: -118
Score: 5.5
Sequence: TTCTTGATGAGCGTCAATTT
Locus tag: LSL_1781
LSL_1781 -118 5.5 TTCTTGATGAGCGTCAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dps
Ortholog function: Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1)
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1781 -118 5.5 TTCTTGATGAGCGTCAATTT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_A05 -66 5.2 TAATTGATCTATATCAAGTA
Position: -89
Score: 5.6
Sequence: TTCTTGATGTGCATCAATTT
Locus tag: LSL_1782
LSL_1782 -89 5.6 TTCTTGATGTGCATCAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: flpA
Ortholog function: Heavy metal resistance transcriptional regulator FlpA, Crp family
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1782 -89 5.6 TTCTTGATGTGCATCAATTT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_A06 -66 5.2 TAATTGATCTATATCAAGTA
Position: -129
Score: 5.9
Sequence: AACTTGATATGCGTCAATTT
Locus tag: LSL_1784
LSL_1784 -129 5.9 AACTTGATATGCGTCAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: copZ
Ortholog function: Copper chaperone
Lactobacillus acidophilus NCFM LBA0542 -81 6 AAATTGACGATCATCAAGTT
Lactobacillus casei ATCC 334 LSEI_0071 -76 5.4 AACTTGACGACGATCAAGGA
Lactobacillus fermentum IFO 3956 LAF_1701 -68 5.1 AAGTTGATGAGGATCAATTA
Lactobacillus johnsonii NCC 533 LJ1695 -82 6 AAATTGACGATCATCAAGTT
Lactobacillus plantarum WCFS1 lp_3442 -75 6 TTCTTGACGGCCGTCAAGTT
Lactobacillus reuteri JCM 1112 LAR_1340 -69 5.7 AAATTGATGATAATCAATTT
Lactobacillus rhamnosus GG LGG_00083 -76 6 AACTTGACGGCCATCAAGGT
Lactobacillus sakei subsp. sakei 23K LSA1783 -79 6.1 AACTTGATGGCGATCAATTT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1784 -129 5.9 AACTTGATATGCGTCAATTT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_A04 -66 5.2 TAATTGATCTATATCAAGTA
Oenococcus oeni PSU-1 OEOE_0354 -126 6 TTCTTGACGGCCGTCAAGTT
Pediococcus pentosaceus ATCC 25745 PEPE_0409 -75 5.7 AAATTGACCTACGTCAATTT
Position: -88
Score: 5.7
Sequence: AACTTGATGTCAGTCAATTA
Locus tag: LSL_1786
LSL_1786 -88 5.7 AACTTGATGTCAGTCAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cadA
Ortholog function: Lead, cadmium, zinc and mercury transporting ATPase (EC:3.6.3.-)
Lactobacillus acidophilus NCFM LBA0541 -75 5.4 ATCTTGATAACAGTCAAGTC
Lactobacillus casei ATCC 334 LSEI_0070 -68 4.8 AAGTTGATCACCGTCAAGGC
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_0427 -77 5.3 ATCTTGATAGAAATCAATTG
Lactobacillus fermentum IFO 3956 LAF_1702 -69 5.2 CTCTTGATTCCGATCAATTT
Lactobacillus johnsonii NCC 533 LJ1696 -75 5.2 ATCTTGATAATAGTCAAGTC
Lactobacillus plantarum WCFS1 lp_3435 -78 6.1 AACTTGACGCCTATCAAGTT
Lactobacillus rhamnosus GG LGG_00082 -68 5.3 AAATTGATCCCGGTCAAGGT
Lactobacillus sakei subsp. sakei 23K LSA1784 -75 6.3 AACTTGATGGCTATCAAGTT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1786 -210 5.6 AACTTGATAGCCATAAATTT
-88 5.7 AACTTGATGTCAGTCAATTA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_A03 -76 6.3 AACTTGATGGACGTCAAGTT
Pediococcus pentosaceus ATCC 25745 PEPE_0411 -75 5.7 AAATTGACCTACGTCAATTT
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