Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of YxeR regulog to Lactobacillus acidophilus NCFM

Reference regulog properties
Source regulog: YxeR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: TetR
Regulation mode: repressor
Biological process: Antibiotic resistance
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus acidophilus NCFM
Orthologous TF(s) LBA1840
Regulated genes 2
Built upon 20 sites [see more]
Predicted regulatory interactions in Lactobacillus acidophilus NCFM
Locus tag Position Score Sequence
Position: -81
Score: 3.6
Sequence: TTATTGACAACTCGTCACAAT
Position: -42
Score: 4.8
Sequence: TTAGTGACAAAACGTCATAAG
Locus tag: LBA1840
LBA1840 -81 3.6 TTATTGACAACTCGTCACAAT
-42 4.8 TTAGTGACAAAACGTCATAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: yxeR
Ortholog function: Predicted antibiotic resistance transcriptional reguator, TetR family
Lactobacillus acidophilus NCFM LBA1840 -81 3.6 TTATTGACAACTCGTCACAAT
Lactobacillus helveticus DPC 4571 lhv_1880 -80 4.5 GTATTGACAATGCGTCACAAA