Propagation of CcpA regulog to Lactobacillus gasseri ATCC 33323
| Source regulog: | CcpA - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Carbon catabolism |
| Effector: | HPr, phosphocarrier protein; Fructose-1,6-bisphosphate |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Lactobacillus gasseri ATCC 33323 |
| Orthologous TF(s) | LGAS_0436 |
| Regulated genes | 31 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -40
Score: 5 Sequence: TTGAAACCGCTTTCTA
Locus tag: LGAS_0152
|
||||
| LGAS_0152 | -40 | 5 | TTGAAACCGCTTTCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pck | ||||
| Ortholog function: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49) | ||||
| Lactobacillus johnsonii NCC 533 | LJ0149 | -38 | 5 | TTGAAACCGCTTTCTA |
| Lactobacillus plantarum WCFS1 | lp_3418 | -68 | 4.8 | AAGAAAACGCTTTCTT |
| Lactobacillus rhamnosus GG | LGG_01876 | -85 | 4.4 | GTGAAAGCCTTTTCAA |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0395 | -46 | 4.4 | ATGAAAGCGTATTATA |
|
Position: -10
Score: 4.4 Sequence: GTGTAAGCGATTGCAA
Locus tag: LGAS_0196
|
||||
| LGAS_0196 | -10 | 4.4 | GTGTAAGCGATTGCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bglB | ||||
| Ortholog function: Beta-glucosidase (EC 3.2.1.21); 6-phospho-beta-glucosidase (EC 3.2.1.86) | ||||
| Lactobacillus acidophilus NCFM | LBA0885 | -35 | 4.8 | ATGAAAGCGATTACAG |
| Lactobacillus helveticus DPC 4571 | lhv_0941 | -34 | 4 | CTGAAAGCACTTACAG |
| Lactobacillus johnsonii NCC 533 | LJ0194 | -28 | 4.7 | ATGTAAGCGATTGCAA |
| Lactobacillus plantarum WCFS1 | lp_3011 | -43 | 4.5 | AGGAAAGCGTTTTCCA |
| Oenococcus oeni PSU-1 | OEOE_1210 | -93 | 4.5 | ATGGTAGCGATTTCAT |
| Pediococcus pentosaceus ATCC 25745 | PEPE_1776 | -34 | 4.8 | ATGAAAGCGAATTCAA |
|
Position: -79
Score: 4.3 Sequence: TTGATACCGGTAACAT
Position: -53
Score: 5 Sequence: TTGTAAGCGCTTAAAA
Locus tag: LGAS_0214
|
||||
| LGAS_0214 | -79 | 4.3 | TTGATACCGGTAACAT | |
| -53 | 5 | TTGTAAGCGCTTAAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: agl | ||||
| Ortholog function: Oligo-1,6-glucosidase (EC 3.2.1.10) | ||||
| Lactobacillus acidophilus NCFM | LBA1872 | -49 | 5 | TTGAAAACGGTTTCTT |
| Lactobacillus casei ATCC 334 | LSEI_0980 | -80 | 4.4 | TTGATAACGGTAACAA |
| Lactobacillus helveticus DPC 4571 | lhv_2002 | -34 | 4.3 | TTGAAAACGGTTTCCC |
| Lactobacillus johnsonii NCC 533 | LJ0211 | -53 | 5 | TTGTAAGCGCTTATAA |
|
Position: -94
Score: 4.3 Sequence: TTGATACCGGTAACAT
Locus tag: LGAS_0216
|
||||
| LGAS_0216 | -94 | 4.3 | TTGATACCGGTAACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mapA | ||||
| Ortholog function: Maltose phosphorylase (EC 2.4.1.8) / Trehalose phosphorylase (EC 2.4.1.64) | ||||
| Lactobacillus acidophilus NCFM | LBA1870 | -74 | 4.4 | TGTAAACCGCTTTCAA |
| -48 | 4.6 | ATGAAAGCGTAAACAA | ||
| Lactobacillus casei ATCC 334 | LSEI_0982 | -127 | 4.5 | ATGATAGCGGTAACAT |
| Lactobacillus helveticus DPC 4571 | lhv_2000 | -76 | 4.4 | TGTAAACCGCTTTCAA |
| Lactobacillus johnsonii NCC 533 | LJ0213 | -70 | 4.5 | TGTTAAGCGCTTTCAA |
|
Position: -118
Score: 4 Sequence: ATGAATACGCTATTTT
Locus tag: LGAS_0231
|
||||
| LGAS_0231 | -118 | 4 | ATGAATACGCTATTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: guaA | ||||
| Ortholog function: GMP synthase (EC 6.3.5.2) | ||||
| Lactobacillus johnsonii NCC 533 | LJ0229 | -120 | 4 | ATTAAAGCGCTATTTT |
| Lactobacillus plantarum WCFS1 | lp_0914 | -61 | 4.2 | TTGATAAGGGTTTCAT |
| Lactobacillus sakei subsp. sakei 23K | LSA0139 | -44 | 3.8 | ATGTAACCGTTTAGCA |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_1537 | -75 | 4.2 | TTGAAAGCGTAATATT |
| Pediococcus pentosaceus ATCC 25745 | PEPE_0412 | -103 | 4.3 | TTGATAGCCTTTTCAT |
|
Position: -72
Score: 4.4 Sequence: ATGAAAGCGCTATACT
Locus tag: LGAS_0431
|
||||
| LGAS_0431 | -72 | 4.4 | ATGAAAGCGCTATACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ackB | ||||
| Ortholog function: Acetate kinase (EC 2.7.2.1) | ||||
| Lactobacillus acidophilus NCFM | LBA1873 | -72 | 4.4 | ATGAAAGCGCTATACT |
| Lactobacillus helveticus DPC 4571 | lhv_2003 | -178 | 4.5 | ATGAAAGCGCTATATT |
| Lactobacillus johnsonii NCC 533 | LJ0485 | -68 | 4.4 | ATGAAAGCGCTATACT |
|
Position: -85
Score: 4.2 Sequence: TTGCAACCGTTTACGA
Locus tag: LGAS_0435
|
||||
| LGAS_0435 | -85 | 4.2 | TTGCAACCGTTTACGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pepQ | ||||
| Ortholog function: Xaa-Pro dipeptidase (EC 3.4.13.9) | ||||
| Lactobacillus acidophilus NCFM | LBA0430 | -85 | 4.6 | TTGCAAACGTTTACAG |
| Lactobacillus brevis ATCC 367 | LVIS_1204 | -103 | 4.9 | TTGAAAACGTTTTCGA |
| Lactobacillus casei ATCC 334 | LSEI_0808 | -229 | 4.2 | ATGCAAGCGTTTTACT |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | LBUL_1474 | -89 | 4 | GTGCAATCGCTTACAG |
| Lactobacillus helveticus DPC 4571 | lhv_0456 | -86 | 4.6 | GTGCAAACGTTTACAT |
| Lactobacillus johnsonii NCC 533 | LJ0490 | -85 | 4.2 | TTGCAACCGTTTACGA |
| Lactobacillus plantarum WCFS1 | lp_2258 | -158 | 5.2 | TTGAAATCGCTTTCAT |
| Lactobacillus sakei subsp. sakei 23K | LSA0414 | -120 | 4.1 | ATGCAAGCGGTTTACA |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0419 | -125 | 4 | TTGCAAGCGTTTCATA |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0543 | -124 | 4.9 | TTGCAAACGCTTACAA |
| -102 | 4.2 | TTATAAGTGTTTTCAT | ||
| Pediococcus pentosaceus ATCC 25745 | PEPE_1251 | -109 | 4.6 | ATGAATACGTTATCAA |
|
Position: -29
Score: 4 Sequence: TCGTAAACGGTTGCAA
Locus tag: LGAS_0436
|
||||
| LGAS_0436 | -29 | 4 | TCGTAAACGGTTGCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ccpA | ||||
| Ortholog function: Carbon catabolism global transcriptional regulator CcpA, LacI family | ||||
| Lactobacillus acidophilus NCFM | LBA0431 | -75 | 4.4 | CTGTAAACGTTTGCAA |
| Lactobacillus brevis ATCC 367 | LVIS_1203 | -107 | 4.7 | TCGAAAACGTTTTCAA |
| -49 | 4.1 | TTGAAAACGGATGAAA | ||
| Lactobacillus casei ATCC 334 | LSEI_0809 | -94 | 4 | AGTAAAACGCTTGCAT |
| Lactobacillus helveticus DPC 4571 | lhv_0457 | -76 | 4.3 | ATGTAAACGTTTGCAC |
| Lactobacillus johnsonii NCC 533 | LJ0491 | -74 | 4 | TCGTAAACGGTTGCAA |
| Lactobacillus plantarum WCFS1 | lp_2256 | -121 | 5.2 | ATGAAAGCGATTTCAA |
| -51 | 4 | ATGAAAACGGATGAAA | ||
| Lactobacillus rhamnosus GG | LGG_00793 | -95 | 4 | AGTAAAACGCTTGCAT |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0544 | -114 | 4.4 | ATGAAAACACTTATAA |
| -92 | 4.9 | TTGTAAGCGTTTGCAA | ||
| Oenococcus oeni PSU-1 | OEOE_0684 | -59 | 4.6 | ATGTAATCGCTTGCAT |
| Pediococcus pentosaceus ATCC 25745 | PEPE_1250 | -69 | 4.6 | TTGATAACGTATTCAT |
|
Position: -171
Score: 4.9 Sequence: ATAAAAGCGTTTACAT
Locus tag: LGAS_0499
|
||||
| LGAS_0499 | -171 | 4.9 | ATAAAAGCGTTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: srlM | ||||
| Ortholog function: Sorbitol operon transcription regulator | ||||
| Lactobacillus casei ATCC 334 | LSEI_2728 | -304 | 4.1 | ATGTAACGGCTTATAT |
|
Position: -68
Score: 4.4 Sequence: AAGTAAGCTTTTTCAT
Position: 0
Score: 4.5 Sequence: ATGAAAGCGGATACTT
Locus tag: LGAS_0535
|
||||
| LGAS_0535 | -68 | 4.4 | AAGTAAGCTTTTTCAT | |
| 0 | 4.5 | ATGAAAGCGGATACTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: treP | ||||
| Ortholog function: Trehalose-specific PTS system, EIIABC component (EC 2.7.1.69) | ||||
| Lactobacillus acidophilus NCFM | LBA1012 | -96 | 4.3 | TTGTGATCGCTTTCAA |
| -29 | 4.8 | ATGAAAACGCTTTATA | ||
| Lactobacillus casei ATCC 334 | LSEI_0631 | -90 | 4.2 | TTAAAAGCGTTTAAAC |
| -27 | 4.3 | GTGAAAGCGATTTCTG | ||
| Lactobacillus johnsonii NCC 533 | LJ0760 | -104 | 4.4 | AAGTAAGCTTTTTCAT |
| -36 | 4.5 | ATGAAAGCGGATACTT | ||
| Lactobacillus plantarum WCFS1 | lp_3240 | -118 | 4.8 | AAGAAAGCGCTTTTAT |
| Lactobacillus plantarum WCFS1 | lp_0264 | -29 | 4.7 | ATGAAAACGATAACAA |
| Lactobacillus rhamnosus GG | LGG_00603 | -27 | 4.3 | GTGAAAACGGTTACTG |
| Lactobacillus sakei subsp. sakei 23K | LSA1200 | -105 | 4.4 | TTGTAAACGGTTCAAA |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_1512 | -96 | 4.5 | TTGTAAACAATTTCAT |
| -27 | 4.1 | AAGAAAAGGTTTTCAG | ||
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0507 | -86 | 5.1 | TTGTAACCGTTTACAT |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0508 | -86 | 5.1 | TTGTAACCGTTTACAT |
| Oenococcus oeni PSU-1 | OEOE_1342 | -96 | 4.5 | TTGAAAACGCTTTATG |
| Oenococcus oeni PSU-1 | OEOE_1341 | -96 | 4.5 | TTGAAAACGCTTTATG |
| Pediococcus pentosaceus ATCC 25745 | PEPE_1804 | -199 | 4.6 | TTAGAAACGCTTACAT |
| -56 | 4.7 | TAGCAAGCGCTTACAA | ||
|
Position: 4
Score: 4.4 Sequence: AAGTATCCGCTTTCAT
Locus tag: LGAS_0534
|
||||
| LGAS_0534 | 4 | 4.4 | AAGTATCCGCTTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: treR | ||||
| Ortholog function: Trehalose utilization transcriptional regulator TreR, GntR family | ||||
| Lactobacillus acidophilus NCFM | LBA1013 | -169 | 4.7 | TATAAAGCGTTTTCAT |
| -102 | 4.5 | TTGAAAGCGATCACAA | ||
| Lactobacillus casei ATCC 334 | LSEI_0629 | -90 | 4.2 | TTAAAAGCGTTTAAAC |
| -27 | 4.3 | GTGAAAGCGATTTCTG | ||
| Lactobacillus johnsonii NCC 533 | LJ0759 | 4 | 4.4 | AAGTATCCGCTTTCAT |
| Lactobacillus plantarum WCFS1 | lp_0262 | -29 | 4.7 | ATGAAAACGATAACAA |
| Lactobacillus rhamnosus GG | LGG_00601 | -27 | 4.3 | GTGAAAACGGTTACTG |
| Lactobacillus sakei subsp. sakei 23K | LSA1201 | -145 | 4.2 | GTAAAAGCGCTTTCTG |
| -82 | 4.4 | TTTGAACCGTTTACAA | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_1513 | -130 | 4.2 | ATGAAATTGTTTACAA |
| Oenococcus oeni PSU-1 | OEOE_1339 | -122 | 4.1 | TTGAAAACGAAAACTT |
| -66 | 4.5 | TGAAAAACGTTTTCAA | ||
| Pediococcus pentosaceus ATCC 25745 | PEPE_1805 | -177 | 4.7 | TTGTAAGCGCTTGCTA |
| -34 | 4.6 | ATGTAAGCGTTTCTAA | ||
|
Position: -133
Score: 4.5 Sequence: TTGAAAGCGAAAACAT
Locus tag: LGAS_0881
|
||||
| LGAS_0881 | -133 | 4.5 | TTGAAAGCGAAAACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pfk | ||||
| Ortholog function: 6-phosphofructokinase (EC 2.7.1.11) | ||||
| Lactobacillus acidophilus NCFM | LBA0956 | -134 | 4.2 | ATGTAAGTGCTAACAT |
| Lactobacillus helveticus DPC 4571 | lhv_1049 | -136 | 4.2 | ATGTAAGTGCTAACAT |
| Lactobacillus johnsonii NCC 533 | LJ1079 | -132 | 4.5 | TTGAAAGCGAAAACAT |
| Pediococcus pentosaceus ATCC 25745 | PEPE_1093 | -116 | 4 | AATAAAGCACTTACAT |
|
Position: -29
Score: 4.6 Sequence: ATGTAAGCGCTAATAT
Locus tag: LGAS_1071
|
||||
| LGAS_1071 | -29 | 4.6 | ATGTAAGCGCTAATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ydgI | ||||
| Ortholog function: Putative NAD(P)H nitroreductase | ||||
| Lactobacillus johnsonii NCC 533 | LJ1256 | -35 | 4.6 | ATGTAAGCGCTAATAA |
|
Position: -60
Score: 4.5 Sequence: CTGAAATCGATTTCAA
Locus tag: LGAS_1263
|
||||
| LGAS_1263 | -60 | 4.5 | CTGAAATCGATTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pmi | ||||
| Ortholog function: Mannose-6-phosphate isomerase (EC 5.3.1.8) | ||||
| Lactobacillus acidophilus NCFM | LBA0745 | -58 | 4.3 | AAGAAAAGGGTTTCAT |
| Lactobacillus brevis ATCC 367 | LVIS_1656 | -86 | 4.8 | TAGAAAGCGCTTGCAA |
| Lactobacillus helveticus DPC 4571 | lhv_0789 | -58 | 4.3 | AAGAAAAGGGTTTCAT |
| Lactobacillus johnsonii NCC 533 | LJ0916 | -60 | 4.6 | TTGAAAGTGGTTTCAA |
| Lactobacillus sakei subsp. sakei 23K | LSA1146 | -99 | 4.1 | ACGAAATCGCTTTAAA |
| Oenococcus oeni PSU-1 | OEOE_0249 | -30 | 4.9 | ATGATAACGCTTACAT |
| Pediococcus pentosaceus ATCC 25745 | PEPE_1334 | -21 | 4.3 | ATGAAAGGGGTTTTAT |
|
Position: -72
Score: 4.2 Sequence: ATGATAGCAATTTCAT
Locus tag: LGAS_1319
|
||||
| LGAS_1319 | -72 | 4.2 | ATGATAGCAATTTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pgm | ||||
| Ortholog function: D-Ribose 1,5-phosphomutase (EC 5.4.2.7) | ||||
| Lactobacillus casei ATCC 334 | LSEI_0949 | -102 | 3.9 | TTGAGCGCGTTTTCAA |
| Lactobacillus johnsonii NCC 533 | LJ0862 | -121 | 4.3 | ATAAAAGCGTTTAATA |
| Lactobacillus plantarum WCFS1 | lp_0764 | -40 | 4.4 | TTGTAAGCACTAACAA |
| Lactobacillus rhamnosus GG | LGG_00921 | -100 | 3.9 | TTGAGCGCGTTTTCAA |
| Pediococcus pentosaceus ATCC 25745 | PEPE_0446 | -77 | 4.1 | AAAAAAACGCTTTCTG |
|
Position: -24
Score: 5.1 Sequence: ATGAAAACGATTACAA
Locus tag: LGAS_1322
|
||||
| LGAS_1322 | -24 | 5.1 | ATGAAAACGATTACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galK | ||||
| Ortholog function: Galactokinase (EC 2.7.1.6) | ||||
| Lactobacillus acidophilus NCFM | LBA1459 | -36 | 4.3 | CTGAAAACGATTACAG |
| Lactobacillus brevis ATCC 367 | LVIS_1904 | -98 | 4.7 | ATGAAAACGTTTTATA |
| Lactobacillus fermentum IFO 3956 | LAF_1792 | -99 | 4.1 | ATGTAAGCGCTCTATT |
| Lactobacillus helveticus DPC 4571 | lhv_1501 | -37 | 4.8 | TTGAAAACGATTACAG |
| Lactobacillus johnsonii NCC 533 | LJ0859 | -36 | 5.1 | ATGAAAACGATTACAA |
| Lactobacillus reuteri JCM 1112 | LAR_1662 | -125 | 4.5 | GTGTAATCGTTTTCTT |
| -93 | 4.4 | TTGTAAGCGCTTATTG | ||
|
Position: -109
Score: 4.6 Sequence: ATGTAAACATTTACAT
Locus tag: LGAS_1361
|
||||
| LGAS_1361 | -109 | 4.6 | ATGTAAACATTTACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ptsH | ||||
| Ortholog function: Phosphotransferase system, HPr-related protein | ||||
| Lactobacillus acidophilus NCFM | LBA0639 | -111 | 4.4 | ATGTAAACTGTTACAT |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | LBUL_0512 | -108 | 4.7 | ATGAAAACATTTACAA |
| Lactobacillus helveticus DPC 4571 | lhv_0686 | -109 | 4.4 | ATGTAAGCTATTACAT |
| Lactobacillus johnsonii NCC 533 | LJ0816 | -109 | 4.6 | ATGTAAACATTTACAT |
| Lactobacillus plantarum WCFS1 | lp_1273 | -135 | 4 | ATGAAAGGGCTTGTAT |
| Lactobacillus reuteri JCM 1112 | LAR_1256 | -102 | 4 | TATTTAACGCTTACAA |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0388 | -91 | 4.1 | TTGTTATCGTTTGCAT |
| -68 | 4.2 | ATGTAAACGTGTTCTT | ||
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_1780 | -157 | 5.3 | ATGTAAACGTTTTCAT |
| -63 | 4.7 | TTGTAAGCGCTTTGAT | ||
| Pediococcus pentosaceus ATCC 25745 | PEPE_0609 | -127 | 4 | ATGTAAGGGCTTGCTT |
|
Position: -163
Score: 4.7 Sequence: ATGTAAACGATATCAT
Locus tag: LGAS_1561
|
||||
| LGAS_1561 | -163 | 4.7 | ATGTAAACGATATCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: adhE | ||||
| Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) | ||||
| Lactobacillus acidophilus NCFM | LBA0461 | -161 | 4.3 | AAGCAAGCGCTTCCAT |
| Lactobacillus brevis ATCC 367 | LVIS_0119 | -173 | 4.4 | CTGTATGCGCTTACAT |
| Lactobacillus fermentum IFO 3956 | LAF_0277 | -197 | 4.7 | TTGAAAACGCTTTCTC |
| Lactobacillus johnsonii NCC 533 | LJ1766 | -162 | 4.5 | ATGTAACCGATAACAT |
| Lactobacillus reuteri JCM 1112 | LAR_0310 | -132 | 4.8 | TTGTAAGCGAATTCAT |
| Lactobacillus sakei subsp. sakei 23K | LSA0379 | -74 | 4.5 | TTACAAACGGTTTCAA |
|
Position: -27
Score: 4.3 Sequence: GAGAAAGCGCTTTATA
Locus tag: LGAS_1626
|
||||
| LGAS_1626 | -27 | 4.3 | GAGAAAGCGCTTTATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gabD | ||||
| Ortholog function: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NADP+] (EC 1.2.1.16) | ||||
| Lactobacillus acidophilus NCFM | LBA1632 | -66 | 4.7 | TTGTAAACGCTTTATA |
| Lactobacillus brevis ATCC 367 | LVIS_0323 | -150 | 4.9 | TTGAAAACGGTTAAAT |
| Lactobacillus casei ATCC 334 | LSEI_2278 | -18 | 4.1 | AAGGGAGCGTTTTCAA |
| Lactobacillus fermentum IFO 3956 | LAF_0045 | -62 | 4.3 | GAAAAAGCGGTTACAA |
| Lactobacillus johnsonii NCC 533 | LJ0671 | -44 | 4.6 | AAGAAAGCGCTTTATA |
| Lactobacillus plantarum WCFS1 | lp_3092 | -45 | 4 | GATTAACCGTTTACAA |
| Lactobacillus reuteri JCM 1112 | LAR_0033 | -132 | 4.1 | ATAAAAGGGCTTTTAT |
| -30 | 4.6 | ATGTAAGCGTTTATTT | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_1298 | -37 | 4.3 | ATGTAAGCGTACTCAA |
| Pediococcus pentosaceus ATCC 25745 | PEPE_1821 | -55 | 4.8 | ATGAAAGCGTATTCTT |
|
Position: -173
Score: 4.6 Sequence: AAGAAAGCGCTTTATT
Locus tag: LGAS_1654
|
||||
| LGAS_1654 | -173 | 4.6 | AAGAAAGCGCTTTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pnuC | ||||
| Ortholog function: NrdR-regulated deoxyribonucleotide transporter; Nicotinamide mononucleotide transporter | ||||
| Lactobacillus acidophilus NCFM | LBA1653 | -190 | 4.7 | ATAAAAGCGTTTTAAA |
| Lactobacillus brevis ATCC 367 | LVIS_0311 | -188 | 4.6 | TTGAAAGCGCTTTATG |
| Lactobacillus johnsonii NCC 533 | LJ0643 | -173 | 4.6 | AAGAAAGCGCTATCTA |
| Lactobacillus rhamnosus GG | LGG_01221 | -158 | 4.1 | ATGAAAAGGGTTTCCA |
|
Position: -104
Score: 4.8 Sequence: ATGAAAGCGCTATTAT
Locus tag: LGAS_1670
|
||||
| LGAS_1670 | -104 | 4.8 | ATGAAAGCGCTATTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: licT | ||||
| Ortholog function: Beta-glucoside bgl operon transcriptional antiterminator, BglG family | ||||
| Lactobacillus acidophilus NCFM | LBA0724 | -196 | 4.3 | TTTAAAACATTTTCAT |
| -163 | 4.8 | TTGACACCGCTTTCAA | ||
| Lactobacillus johnsonii NCC 533 | LJ0623 | -141 | 4.7 | ATGTAAGCGCTATTAT |
| Lactobacillus plantarum WCFS1 | lp_3529 | -160 | 4.7 | TTGACACCGCTTACAA |
|
Position: -40
Score: 4.3 Sequence: TTGGAAGCGTTTATCA
Locus tag: LGAS_1728
|
||||
| LGAS_1728 | -40 | 4.3 | TTGGAAGCGTTTATCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fruR | ||||
| Ortholog function: Fructose utilization transcriptional regulator FruR, DeoR family | ||||
| Lactobacillus acidophilus NCFM | LBA1779 | -37 | 4.2 | GAGAAAGCGAATACAA |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | LBUL_1889 | -164 | 4 | GAGAAAGCCTTTACAA |
| Lactobacillus helveticus DPC 4571 | lhv_1846 | 12 | 4.3 | GAGAAAGCGGATACAA |
| Lactobacillus johnsonii NCC 533 | LJ0570 | -40 | 4.1 | CTGAAAGCGTTTATCA |
| Lactobacillus plantarum WCFS1 | lp_2095 | -6 | 4.3 | TTGAAAGTGCTTACAG |
| Lactobacillus sakei subsp. sakei 23K | LSA1048 | -130 | 4 | ATGAAAACCTTTACAC |
| -40 | 4.3 | TTGTAAACGATGACAT | ||
| Pediococcus pentosaceus ATCC 25745 | PEPE_1166 | -6 | 4.3 | ATGAAAGTGCTTACAG |
|
Position: -127
Score: 4.6 Sequence: AAGAAAGCGGTAACAT
Locus tag: LGAS_1756
|
||||
| LGAS_1756 | -127 | 4.6 | AAGAAAGCGGTAACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: licT | ||||
| Ortholog function: Beta-glucoside bgl operon transcriptional antiterminator, BglG family | ||||
| Lactobacillus acidophilus NCFM | LBA1708 | -131 | 5.1 | ATGAAAGCGTTATCAT |
| Lactobacillus johnsonii NCC 533 | LJ0542 | -126 | 4.6 | AAGAAAGCGATATCAT |
| Lactobacillus plantarum WCFS1 | lp_0904 | -147 | 4.5 | GAGAAAACGCTATCAT |
|
Position: -217
Score: 4.6 Sequence: ATGTAAACGCATTCTT
Position: -69
Score: 4.5 Sequence: TAGAATGCGCTATCAT
Position: -37
Score: 4.4 Sequence: TTAAAAACGCTTACAC
Locus tag: LGAS_1778
|
||||
| LGAS_1778 | -217 | 4.6 | ATGTAAACGCATTCTT | |
| -69 | 4.5 | TAGAATGCGCTATCAT | ||
| -37 | 4.4 | TTAAAAACGCTTACAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: scrA | ||||
| Ortholog function: Sucrose-specific PTS system, IIABC component (EC 2.7.1.69) | ||||
| Lactobacillus acidophilus NCFM | LBA0401 | -219 | 4.7 | ATGTAAGCGTTATCTT |
| -30 | 4.9 | ATAAAAGCGTTTACAT | ||
| Lactobacillus fermentum IFO 3956 | LAF_1578 | -126 | 4.4 | TTGGCAGCGATTTCAA |
| -57 | 4.5 | AGAAAAGCGCTTACAA | ||
| Lactobacillus johnsonii NCC 533 | LJ0519 | -214 | 4.6 | ATGTAAACGCATTCTT |
| -37 | 4.4 | TTTAAAACGCTTACAC | ||
| Lactobacillus plantarum WCFS1 | lp_0185 | -212 | 4.3 | ATAAAACCGCTTACAC |
| -157 | 4 | ATGTCAGCGTTTCAAA | ||
| -58 | 4.1 | TGTAAAGCGCTTGCAT | ||
| Lactobacillus sakei subsp. sakei 23K | LSA1792 | -183 | 4.2 | ATGTAAACGTTTGATA |
| -54 | 4.5 | TGAAAAGCGTTTACAA | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0066 | -52 | 4.2 | CATTAAGCGTTTTCAA |
| Pediococcus pentosaceus ATCC 25745 | PEPE_0518 | -212 | 4.3 | ATAAAACCGCTTACAC |
| -157 | 4 | ATGTCAGCGTTTCAAA | ||
| -58 | 4.1 | TGTAAAGCGCTTGCAT | ||
|
Position: -217
Score: 4.7 Sequence: GTGTAAGCGTTTTTAA
Position: -37
Score: 4.6 Sequence: AAGAATGCGTTTACAT
Locus tag: LGAS_1779
|
||||
| LGAS_1779 | -217 | 4.7 | GTGTAAGCGTTTTTAA | |
| -37 | 4.6 | AAGAATGCGTTTACAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: scrB | ||||
| Ortholog function: Sucrose-6-phosphate hydrolase (EC 3.2.1.26) | ||||
| Lactobacillus acidophilus NCFM | LBA0400 | -220 | 4.9 | ATGTAAACGCTTTTAT |
| -188 | 4.5 | ATGATAACGTATTCAA | ||
| -31 | 4.6 | AAGATAACGCTTACAT | ||
| Lactobacillus johnsonii NCC 533 | LJ0518 | -214 | 4.7 | GTGTAAGCGTTTTAAA |
| -184 | 4.3 | ATGATAGCGTATTCTA | ||
| -37 | 4.6 | AAGAATGCGTTTACAT | ||
| Lactobacillus plantarum WCFS1 | lp_0187 | -213 | 4.3 | ATGCAAGCGCTTTACA |
| -59 | 4.6 | GTGTAAGCGGTTTTAT | ||
| Lactobacillus sakei subsp. sakei 23K | LSA1793 | -188 | 4.5 | TTGTAAACGCTTTTCA |
| -163 | 4.3 | ATACAACCGTTTACAT | ||
| -59 | 4.1 | TATCAAACGTTTACAT | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0065 | -121 | 4.1 | ATTTAACCGCTTTTTT |
| -33 | 4.5 | AAGAATACGTTTACAA | ||
| Pediococcus pentosaceus ATCC 25745 | PEPE_0519 | -213 | 4.3 | ATGCAAGCGCTTTACA |
| -59 | 4.6 | GTGTAAGCGGTTTTAT | ||
|
Position: -16
Score: 4.4 Sequence: ATGAAAAGGTTTTTAT
Locus tag: LGAS_1792
|
||||
| LGAS_1792 | -16 | 4.4 | ATGAAAAGGTTTTTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: manO | ||||
| Ortholog function: Predicted regulator of the mannose operon, ManO | ||||
| Lactobacillus fermentum IFO 3956 | LAF_0394 | -140 | 4.7 | TAGTAAGCGTTTACAG |
| Lactobacillus johnsonii NCC 533 | LJ0506 | -106 | 4.4 | ATGCAAGCATTTTCAA |
| -68 | 4.1 | AAGCAAACGTATACAT | ||
| Lactobacillus plantarum WCFS1 | lp_0583 | 1 | 4 | TGGTAAGCATTATCAT |
| Lactobacillus sakei subsp. sakei 23K | LSA0452 | -136 | 4.2 | AGTAAAGCGTTTTAAA |
| -57 | 4.6 | TTGTTAGCGTTTTTAT | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0560 | -71 | 4.2 | TTGTAAGCATTTACGA |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0089 | -109 | 4.3 | TAGAAATCGTTTACAC |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_1765 | -100 | 4.7 | ATGTAAACGGTAACAA |
| -75 | 5.4 | TTGAAAGCGTTTACAA | ||
| Pediococcus pentosaceus ATCC 25745 | PEPE_1515 | -146 | 4.5 | TTGAAAGCGTTTTTTG |
|
Position: -106
Score: 4.1 Sequence: ATGCAAGCATTTTCAG
Position: -68
Score: 4.5 Sequence: AAGTAAACGTATACAT
Locus tag: LGAS_1795
|
||||
| LGAS_1795 | -106 | 4.1 | ATGCAAGCATTTTCAG | |
| -68 | 4.5 | AAGTAAACGTATACAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: manL | ||||
| Ortholog function: Mannose-specific PTS system, IIAB component (EC 2.7.1.69) | ||||
| Lactobacillus acidophilus NCFM | LBA0452 | -42 | 4.5 | ATAAAAGCGGATTCAT |
| Lactobacillus fermentum IFO 3956 | LAF_0391 | -140 | 4.7 | TAGTAAGCGTTTACAG |
| Lactobacillus helveticus DPC 4571 | lhv_0480 | -42 | 4.5 | ATAAAAGCGGATTCAT |
| Lactobacillus johnsonii NCC 533 | LJ0503 | -106 | 4.4 | ATGCAAGCATTTTCAA |
| -68 | 4.1 | AAGCAAACGTATACAT | ||
| Lactobacillus plantarum WCFS1 | lp_0575 | 1 | 4 | TGGTAAGCATTATCAT |
| Lactobacillus sakei subsp. sakei 23K | LSA0449 | -136 | 4.2 | AGTAAAGCGTTTTAAA |
| -57 | 4.6 | TTGTTAGCGTTTTTAT | ||
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0086 | -109 | 4.3 | TAGAAATCGTTTACAC |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0654 | -131 | 4.3 | TAGTAAGTGTTTTCAA |
| -61 | 4.1 | ATGAAAAGGCTTTATT | ||
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_1768 | -100 | 4.7 | ATGTAAACGGTAACAA |
| -75 | 5.4 | TTGAAAGCGTTTACAA | ||
| Pediococcus pentosaceus ATCC 25745 | PEPE_1518 | -146 | 4.5 | TTGAAAGCGTTTTTTG |
|
Position: -79
Score: 4.5 Sequence: TGGCAAACGCTTTCAA
Locus tag: LGAS_1893
|
||||
| LGAS_1893 | -79 | 4.5 | TGGCAAACGCTTTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: spxB | ||||
| Ortholog function: Pyruvate oxidase (EC 1.2.3.3) | ||||
| Lactobacillus acidophilus NCFM | LBA1974 | -110 | 4.4 | GAAAAAGCGGTTTCAT |
| -78 | 4 | AAGATAGCGTTTTGAA | ||
| Lactobacillus brevis ATCC 367 | LVIS_0313 | -152 | 4.3 | TTGAAAGCGTGAACAA |
| Lactobacillus casei ATCC 334 | LSEI_1784 | -149 | 4 | GTTTAAGCGTTTTATA |
| -92 | 4.4 | ATGAAAGGGCTTGCAT | ||
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | LBUL_2034 | -76 | 4 | TTGATAGCACTTGCAA |
| Lactobacillus johnsonii NCC 533 | LJ1853 | -79 | 4.1 | CAGCAACCGCTTTCAA |
| Lactobacillus plantarum WCFS1 | lp_0849 | -390 | 4.3 | ATGTAAGCGTCATCAT |
| -86 | 4.9 | ATAAAAGCGTTTACAT | ||
| Lactobacillus rhamnosus GG | LGG_01836 | -136 | 4.6 | ATTAAAGCGCTTTCCT |
| -89 | 4.1 | GTGAAAGGGTTTGCAT | ||
| Lactobacillus sakei subsp. sakei 23K | LSA1830 | -71 | 4.1 | TTTGTAACGCTTACAA |