Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of TagR regulog to Lactobacillus rhamnosus Lc 705

Reference regulog properties
Source regulog: TagR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor
Biological process: Tagatose utilization
Effector: Tagatose-6-phosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus rhamnosus Lc 705
Orthologous TF(s) LC705_02654
Regulated genes 2
Built upon 8 sites [see more]
Predicted regulatory interactions in Lactobacillus rhamnosus Lc 705
Locus tag Position Score Sequence
Position: -112
Score: 4.8
Sequence: TGAAAAGCATTTTC
Locus tag: LC705_02653
LC705_02653 -112 4.8 TGAAAAGCATTTTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: tagK
Ortholog function: Tagatose-6-phosphate kinase (EC 2.7.1.144) / 1-phosphofructokinase
Lactobacillus casei ATCC 334 LSEI_2655 -112 4.8 TGAAAAGCATTTTC
Lactobacillus rhamnosus GG LGG_02648 -112 4.8 TGAAAAGCATTTTC
Pediococcus pentosaceus ATCC 25745 PEPE_0141 -60 4.6 TGAAAACATTTACA
Position: -50
Score: 4.8
Sequence: GAAAATGCTTTTCA
Locus tag: LC705_02654
LC705_02654 -50 4.8 GAAAATGCTTTTCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: tagR
Ortholog function: Tagatose utilization transcriptional regulator TagR, RpiR family
Lactobacillus casei ATCC 334 LSEI_2656 -27 4.8 GAAAATGCTTTTCA
Lactobacillus johnsonii NCC 533 LJ0144 -28 4.7 GGTAAAGTTTTACA
Lactobacillus rhamnosus GG LGG_02649 -50 4.8 GAAAATGCTTTTCA
Pediococcus pentosaceus ATCC 25745 PEPE_0140 -70 4.6 TGTAAATGTTTTCA
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