Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of ArgR regulog to Oenococcus oeni PSU-1

Reference regulog properties
Source regulog: ArgR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: ArgR
Regulation mode: repressor, activator
Biological process: Arginine degradation; Arginine biosynthesis
Effector: Arginine
Phylum: Firmicutes
Propagated regulon:
Target genome Oenococcus oeni PSU-1
Orthologous TF(s) No orthologous TFs found
Regulated genes 4
Built upon 27 sites [see more]
Predicted regulatory interactions in Oenococcus oeni PSU-1
Locus tag Position Score Sequence
Position: -339
Score: 2.9
Sequence: TAAAAATGGTTTTTTAAA
Position: -158
Score: 3.3
Sequence: TGTTTATCATTATTTGAA
Position: -92
Score: 3.3
Sequence: AAAGGAAAATTTATTAAT
Position: -91
Score: 3.3
Sequence: AAGGAAAATTTATTAATT
Position: -85
Score: 3.1
Sequence: AATTTATTAATTATCTAA
Position: -84
Score: 3.3
Sequence: ATTTATTAATTATCTAAC
Position: -37
Score: 3.3
Sequence: CAAGCAAAAATAAAAAAT
Position: -29
Score: 2.9
Sequence: AATAAAAAATTGTTTAAG
Locus tag: OEOE_0939
OEOE_0939 -339 2.9 TAAAAATGGTTTTTTAAA
-158 3.3 TGTTTATCATTATTTGAA
-92 3.3 AAAGGAAAATTTATTAAT
-91 3.3 AAGGAAAATTTATTAATT
-85 3.1 AATTTATTAATTATCTAA
-84 3.3 ATTTATTAATTATCTAAC
-37 3.3 CAAGCAAAAATAAAAAAT
-29 2.9 AATAAAAAATTGTTTAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: argG
Ortholog function: Argininosuccinate synthase (EC 6.3.4.5)
Lactobacillus casei ATCC 334 LSEI_2811 -46 4.4 AATGAGTATATATTCAAT
Lactobacillus fermentum IFO 3956 LAF_1625 -136 2.3 CTTGCATTTTTATTTGAT
Lactobacillus plantarum WCFS1 lp_0775 -139 4.1 TCTGCATAAAAATTCTAT
Lactobacillus reuteri JCM 1112 LAR_0702 -164 4.7 ATTAAATAATTATTCTAT
Lactobacillus rhamnosus GG LGG_02817 -46 4.4 AATGAGTATATATTCAAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0306 -47 3.5 AATGAATAGATTATGAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1459 -73 3.8 ATTGCATATTTAATCAAA
Position: -125
Score: 3.5
Sequence: AATCAATAATATTAGAGC
Position: -39
Score: 2.9
Sequence: TGACCAGAATAATGAAAC
Position: -36
Score: 3.4
Sequence: CCAGAATAATGAAACATT
Position: 15
Score: 3.2
Sequence: AGTGAAGACATCATCATT
Locus tag: OEOE_1427
OEOE_1427 -125 3.5 AATCAATAATATTAGAGC
-39 2.9 TGACCAGAATAATGAAAC
-36 3.4 CCAGAATAATGAAACATT
15 3.2 AGTGAAGACATCATCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: artM
Ortholog function: Arginine ABC transporter, ATP-binding protein
Lactobacillus brevis ATCC 367 LVIS_1201 -161 4.6 AATGTATAAATTTTTATA
-96 4.9 AGTGTATAAAAATAGATA
Lactobacillus casei ATCC 334 LSEI_1345 -56 4.2 ATTGCATAAAAATCAATT
Lactobacillus fermentum IFO 3956 LAF_0624 -63 3.6 CTTGCATAATAATTCGTT
Lactobacillus plantarum WCFS1 lp_2110 -17 3.8 CTTGCATAAATAATCATA
Lactobacillus reuteri JCM 1112 LAR_0697 -253 4.7 ATTGCATAAATAAACATT
Lactobacillus rhamnosus GG LGG_01357 -56 4.3 ATTGCATAAAAATTGAAT
Lactobacillus sakei subsp. sakei 23K LSA1056 -55 4.5 ATTGCATAAATATTTATA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1540 -162 3.5 GTTACATAAATATATTTT
-82 4.3 CTTGCATAAATAAACAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0629 -59 3 GATGCATATAAATTATAA
Pediococcus pentosaceus ATCC 25745 PEPE_1136 -94 5.2 AATGTATAAAAATTCATA
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