Propagation of ArgR regulog to Oenococcus oeni PSU-1
| Source regulog: | ArgR - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | ArgR |
| Regulation mode: | repressor, activator |
| Biological process: | Arginine degradation; Arginine biosynthesis |
| Effector: | Arginine |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Oenococcus oeni PSU-1 |
| Orthologous TF(s) | No orthologous TFs found |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -339
Score: 2.9 Sequence: TAAAAATGGTTTTTTAAA
Position: -158
Score: 3.3 Sequence: TGTTTATCATTATTTGAA
Position: -92
Score: 3.3 Sequence: AAAGGAAAATTTATTAAT
Position: -91
Score: 3.3 Sequence: AAGGAAAATTTATTAATT
Position: -85
Score: 3.1 Sequence: AATTTATTAATTATCTAA
Position: -84
Score: 3.3 Sequence: ATTTATTAATTATCTAAC
Position: -37
Score: 3.3 Sequence: CAAGCAAAAATAAAAAAT
Position: -29
Score: 2.9 Sequence: AATAAAAAATTGTTTAAG
Locus tag: OEOE_0939
|
||||
| OEOE_0939 | -339 | 2.9 | TAAAAATGGTTTTTTAAA | |
| -158 | 3.3 | TGTTTATCATTATTTGAA | ||
| -92 | 3.3 | AAAGGAAAATTTATTAAT | ||
| -91 | 3.3 | AAGGAAAATTTATTAATT | ||
| -85 | 3.1 | AATTTATTAATTATCTAA | ||
| -84 | 3.3 | ATTTATTAATTATCTAAC | ||
| -37 | 3.3 | CAAGCAAAAATAAAAAAT | ||
| -29 | 2.9 | AATAAAAAATTGTTTAAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argG | ||||
| Ortholog function: Argininosuccinate synthase (EC 6.3.4.5) | ||||
| Lactobacillus casei ATCC 334 | LSEI_2811 | -46 | 4.4 | AATGAGTATATATTCAAT |
| Lactobacillus fermentum IFO 3956 | LAF_1625 | -136 | 2.3 | CTTGCATTTTTATTTGAT |
| Lactobacillus plantarum WCFS1 | lp_0775 | -139 | 4.1 | TCTGCATAAAAATTCTAT |
| Lactobacillus reuteri JCM 1112 | LAR_0702 | -164 | 4.7 | ATTAAATAATTATTCTAT |
| Lactobacillus rhamnosus GG | LGG_02817 | -46 | 4.4 | AATGAGTATATATTCAAT |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0306 | -47 | 3.5 | AATGAATAGATTATGAAT |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_1459 | -73 | 3.8 | ATTGCATATTTAATCAAA |
|
Position: -125
Score: 3.5 Sequence: AATCAATAATATTAGAGC
Position: -39
Score: 2.9 Sequence: TGACCAGAATAATGAAAC
Position: -36
Score: 3.4 Sequence: CCAGAATAATGAAACATT
Position: 15
Score: 3.2 Sequence: AGTGAAGACATCATCATT
Locus tag: OEOE_1427
|
||||
| OEOE_1427 | -125 | 3.5 | AATCAATAATATTAGAGC | |
| -39 | 2.9 | TGACCAGAATAATGAAAC | ||
| -36 | 3.4 | CCAGAATAATGAAACATT | ||
| 15 | 3.2 | AGTGAAGACATCATCATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: artM | ||||
| Ortholog function: Arginine ABC transporter, ATP-binding protein | ||||
| Lactobacillus brevis ATCC 367 | LVIS_1201 | -161 | 4.6 | AATGTATAAATTTTTATA |
| -96 | 4.9 | AGTGTATAAAAATAGATA | ||
| Lactobacillus casei ATCC 334 | LSEI_1345 | -56 | 4.2 | ATTGCATAAAAATCAATT |
| Lactobacillus fermentum IFO 3956 | LAF_0624 | -63 | 3.6 | CTTGCATAATAATTCGTT |
| Lactobacillus plantarum WCFS1 | lp_2110 | -17 | 3.8 | CTTGCATAAATAATCATA |
| Lactobacillus reuteri JCM 1112 | LAR_0697 | -253 | 4.7 | ATTGCATAAATAAACATT |
| Lactobacillus rhamnosus GG | LGG_01357 | -56 | 4.3 | ATTGCATAAAAATTGAAT |
| Lactobacillus sakei subsp. sakei 23K | LSA1056 | -55 | 4.5 | ATTGCATAAATATTTATA |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_1540 | -162 | 3.5 | GTTACATAAATATATTTT |
| -82 | 4.3 | CTTGCATAAATAAACAAT | ||
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0629 | -59 | 3 | GATGCATATAAATTATAA |
| Pediococcus pentosaceus ATCC 25745 | PEPE_1136 | -94 | 5.2 | AATGTATAAAAATTCATA |