Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of RpiR regulog to Lactobacillus crispatus ST1

Reference regulog properties
Source regulog: RpiR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: RpiR
Regulation mode: repressor
Biological process: Sugar utilization
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus crispatus ST1
Orthologous TF(s) LCRIS_00507
Regulated genes 2
Built upon 7 sites [see more]
Predicted regulatory interactions in Lactobacillus crispatus ST1
Locus tag Position Score Sequence
Position: -138
Score: 5.3
Sequence: TGAAAATTATTTACA
Position: -52
Score: 5.4
Sequence: TGAAAATTAATTACA
Locus tag: LCRIS_00507
LCRIS_00507 -138 5.3 TGAAAATTATTTACA
-52 5.4 TGAAAATTAATTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rpiR
Ortholog function: Predicted sugar utilization transcriptional regulator, RpiR family
Lactobacillus acidophilus NCFM LBA1172 -107 5.9 TGAAAATTAATTTCA
Lactobacillus casei ATCC 334 LSEI_2316 -154 5.7 TGAAATTATATTTCA
Lactobacillus helveticus DPC 4571 lhv_1519 -118 5.1 TGAAAATAAGTTACA
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1438 -104 5.6 AGAAATTAATTTTCA