Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of Lp_3221 regulog to Lactobacillus rhamnosus HN001

Reference regulog properties
Source regulog: Lp_3221 - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Sugar utilization
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus rhamnosus HN001
Orthologous TF(s) LRH_13539
Regulated genes 2
Built upon 6 sites [see more]
Predicted regulatory interactions in Lactobacillus rhamnosus HN001
Locus tag Position Score Sequence
Position: -38
Score: 6.3
Sequence: GTATGAAATCGATTCCATAA
Locus tag: LRH_13539
LRH_13539 -38 6.3 GTATGAAATCGATTCCATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lp_3221
Ortholog function: Predicted sugar utilization transcriptional regulator, LacI family
Lactobacillus casei ATCC 334 LSEI_2103 -37 6.3 CTATGAAATCGATTCCATAC
Lactobacillus plantarum WCFS1 lp_3221 -36 6.2 TTATGGAAACGATTCCAAAC
Lactobacillus rhamnosus GG LGG_02106 -38 6.3 GTATGAAATCGATTCCATAA
Position: -39
Score: 6.5
Sequence: ATATGGAATCGATACCACAT
Locus tag: LRH_13544
LRH_13544 -39 6.5 ATATGGAATCGATACCACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: agl4
Ortholog function: Oligo-1,6-glucosidase
Lactobacillus casei ATCC 334 LSEI_2102 -58 6.5 ATATGGAATCGATACCACAT
Lactobacillus plantarum WCFS1 lp_3220 -35 6.4 AAGTGGAATCGATTCCAAAT
Lactobacillus rhamnosus GG LGG_02105 -39 6.5 ATATGGAATCGATACCACAT
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