Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of PurR regulog to Lactobacillus helveticus DPC 4571

Reference regulog properties
Source regulog: PurR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: PurR
Regulation mode: repressor
Biological process: Purine metabolism
Effector: 5-phosphoribosyl 1-pyrophosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus helveticus DPC 4571
Orthologous TF(s) lhv_0234
Regulated genes 10
Built upon 76 sites [see more]
Predicted regulatory interactions in Lactobacillus helveticus DPC 4571
Locus tag Position Score Sequence
Position: -27
Score: 4.1
Sequence: AAAGCCAAACGTT
Locus tag: lhv_0234
lhv_0234 -27 4.1 AAAGCCAAACGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purR
Ortholog function: Purine metabolism transcriptional regulator PurR, PurR family
Lactobacillus acidophilus NCFM LBA0218 -27 4.8 AAAACCAAACATT
Lactobacillus brevis ATCC 367 LVIS_0474 -91 5.3 AAACCCGAACAAT
Lactobacillus casei ATCC 334 LSEI_2587 -126 4.8 AAATGCGAACGTT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_0302 -54 4.3 AAAAACAGACATT
Lactobacillus fermentum IFO 3956 LAF_0194 -98 5.2 AAAGACGAACAAT
Lactobacillus helveticus DPC 4571 lhv_0234 -27 4.1 AAAGCCAAACGTT
Lactobacillus johnsonii NCC 533 LJ0207 -105 4.1 TATTACGAACAAT
Lactobacillus plantarum WCFS1 lp_0466 12 4.3 AGAAGCGAACGTT
Lactobacillus reuteri JCM 1112 LAR_0210 -64 5.2 AAATCCGAACATT
Lactobacillus rhamnosus GG LGG_02564 -126 4.8 AAATGCGAACGTT
Lactobacillus sakei subsp. sakei 23K LSA1651 -120 5.6 AAAAACGAACAAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0315 -116 5.4 AAAAACGAACTTT
Pediococcus pentosaceus ATCC 25745 PEPE_0292 -103 5.2 AAATCCGAACATT
Position: -142
Score: 3.9
Sequence: AGAACCTAACAAT
Locus tag: lhv_1532
lhv_1532 -142 3.9 AGAACCTAACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purC
Ortholog function: Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6)
Lactobacillus acidophilus NCFM LBA1559 -151 5.3 AAACACGAACGAT
Lactobacillus casei ATCC 334 LSEI_1754 -107 5.3 AAACACGAACGAT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_1338 -60 3.4 AATTACGAATAGT
Lactobacillus fermentum IFO 3956 LAF_0124 -155 5.6 AAACACGAACATT
Lactobacillus plantarum WCFS1 lp_2727 -104 5 TAACACGAACATT
Lactobacillus reuteri JCM 1112 LAR_0131 -153 5.6 AAACACGAACAAT
Lactobacillus rhamnosus GG LGG_01812 -108 5.5 AAATACGAACATT
-96 4.3 TAAAACGAATAAT
Lactobacillus sakei subsp. sakei 23K LSA0655 -110 4.9 ATAAACGAACTTT
-58 5.6 AAAAACGAACAAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0663 -27 5.2 AAAGACGAACAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0720 -137 4.1 ATATACGAACTCT
Oenococcus oeni PSU-1 OEOE_1136 -130 4.6 AAACACGAAATAT
-79 5.3 AAAAACGAACGTT
Pediococcus pentosaceus ATCC 25745 PEPE_1465 -123 5.4 AAAAACGAACTTT
Position: -73
Score: 4.1
Sequence: AAATACAAACAAA
Locus tag: lhv_1535
lhv_1535 -73 4.1 AAATACAAACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fhs
Ortholog function: Formate--tetrahydrofolate ligase (EC 6.3.4.3)
Lactobacillus acidophilus NCFM LBA1562 -59 4.4 ATATAAGAACAAT
Lactobacillus helveticus DPC 4571 lhv_1535 -73 4.1 AAATACAAACAAA
Position: -24
Score: 3.7
Sequence: TTACACAAACTAT
Locus tag: lhv_1625
lhv_1625 -24 3.7 TTACACAAACTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purD
Ortholog function: Phosphoribosylamine--glycine ligase (EC 6.3.4.13)
Lactobacillus acidophilus NCFM LBA1551 -151 5.3 AAACACGAACGAT
Lactobacillus casei ATCC 334 LSEI_1746 -107 5.3 AAACACGAACGAT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_1330 -60 3.4 AATTACGAATAGT
Lactobacillus plantarum WCFS1 lp_2719 -104 5 TAACACGAACATT
Lactobacillus reuteri JCM 1112 LAR_0139 -153 5.6 AAACACGAACAAT
Lactobacillus rhamnosus GG LGG_01803 -108 5.5 AAATACGAACATT
-96 4.3 TAAAACGAATAAT
Lactobacillus sakei subsp. sakei 23K LSA0663 -110 4.9 ATAAACGAACTTT
-58 5.6 AAAAACGAACAAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0671 -27 5.2 AAAGACGAACAAT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0700 -106 5.3 AAAAACGAACTAT
Pediococcus pentosaceus ATCC 25745 PEPE_1457 -123 5.4 AAAAACGAACTTT
Position: -134
Score: 4.9
Sequence: AAAATCGAACTAT
Locus tag: lhv_2030
lhv_2030 -134 4.9 AAAATCGAACTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purA
Ortholog function: Adenylosuccinate synthetase (EC 6.3.4.4)
Lactobacillus acidophilus NCFM LBA1892 -123 4.9 AAAATCGAACTAT
Lactobacillus brevis ATCC 367 LVIS_0227 -247 5.3 AAAAGCGAACATT
Lactobacillus fermentum IFO 3956 LAF_0044 -123 5.3 AAAACCGAACAAT
Lactobacillus helveticus DPC 4571 lhv_2030 -134 4.9 AAAATCGAACTAT
Lactobacillus johnsonii NCC 533 LJ0442 -120 4.3 AAAAATGAATATT
Lactobacillus plantarum WCFS1 lp_3270 -280 5.6 AAACACGAACATT
-239 4.5 AGAGACGAACAAT
-135 5.1 AAACAAGAACATT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_1460 -132 4.2 AAAAAGCAACATT
Pediococcus pentosaceus ATCC 25745 PEPE_1247 -117 5.1 AAACACGAACCAT
Position: -31
Score: 5.6
Sequence: AAACACGAACATT
Locus tag: lhv_2082
lhv_2082 -31 5.6 AAACACGAACATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pbuO
Ortholog function: Guanine/hypoxanthine permease
Lactobacillus acidophilus NCFM LBA1952 -30 5.6 AAACACGAACAAT
Lactobacillus helveticus DPC 4571 lhv_2082 -31 5.6 AAACACGAACATT
Lactobacillus johnsonii NCC 533 LJ1827 -29 5.6 AAAAACGAACATT
Position: -96
Score: 4.4
Sequence: AAAATCGAACAAA
Position: 29
Score: 4.8
Sequence: AAAAGAGAACAAT
Locus tag: lhv_2087
lhv_2087 -96 4.4 AAAATCGAACAAA
29 4.8 AAAAGAGAACAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pbuO
Ortholog function: Guanine/hypoxanthine permease
Lactobacillus acidophilus NCFM LBA1956 29 4.4 AAAGGAGAACAAT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_2021 -30 4.2 AATTCCGAACGTT
Lactobacillus helveticus DPC 4571 lhv_2087 -96 4.4 AAAATCGAACAAA
Lactobacillus johnsonii NCC 533 LJ1829 -32 5.2 AAATCCGAACATT
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