Propagation of CtsR regulog to Lactobacillus reuteri JCM 1112
| Source regulog: | CtsR - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CtsR |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Lactobacillus reuteri JCM 1112 |
| Orthologous TF(s) | LAR_1405 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -93
Score: 6.7 Sequence: AAACATTTGACCTTTTTTGACCAA
Locus tag: LAR_0379
|
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| LAR_0379 | -93 | 6.7 | AAACATTTGACCTTTTTTGACCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: clpP | ||||
| Ortholog function: ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) | ||||
| Lactobacillus brevis ATCC 367 | LVIS_0654 | -90 | 6.2 | TTTTGTTTGACCTACTCTGACCTT |
| Lactobacillus casei ATCC 334 | LSEI_0963 | -85 | 7 | AAATCTTTGACCTTATTTGACTTT |
| Lactobacillus fermentum IFO 3956 | LAF_0360 | -90 | 6.6 | AATGATTTGACCTTTTTTGACCTA |
| Lactobacillus plantarum WCFS1 | lp_0786 | -92 | 5.8 | TTTCTTTTGACCTTCACTGACCTT |
| Lactobacillus reuteri JCM 1112 | LAR_0379 | -93 | 6.7 | AAACATTTGACCTTTTTTGACCAA |
| Lactobacillus rhamnosus GG | LGG_00931 | -88 | 7 | AAATCTTTGACCTTATTTGACTTT |
| Lactobacillus sakei subsp. sakei 23K | LSA0531 | -116 | 6 | TACCATTTGACCATAGTTGACCTT |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_1168 | -101 | 6.3 | TTAAATTTGACCATTATTGACCTT |
| Pediococcus pentosaceus ATCC 25745 | PEPE_0455 | -95 | 6.9 | AAATATTTGACCTTTTTTGACCAA |
|
Position: -101
Score: 6.5 Sequence: AATTGTTTGACGTTTCTTGACTTT
Locus tag: LAR_0677
|
||||
| LAR_0677 | -101 | 6.5 | AATTGTTTGACGTTTCTTGACTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hrcA | ||||
| Ortholog function: Heat shock response transcriptional regulator HrcA, HrcA family | ||||
| Lactobacillus fermentum IFO 3956 | LAF_0749 | -89 | 6.4 | AGATCTTTGACTTTTGTTGACTTT |
| Lactobacillus plantarum WCFS1 | lp_2029 | -91 | 5.9 | AATACTTTGTCTTTCCTTGACTTT |
| Lactobacillus reuteri JCM 1112 | LAR_0677 | -101 | 6.5 | AATTGTTTGACGTTTCTTGACTTT |
| Lactobacillus sakei subsp. sakei 23K | LSA1238 | -87 | 5.3 | CAATTCTTGACTTTATTTGACGTT |
| Pediococcus pentosaceus ATCC 25745 | PEPE_0894 | -107 | 6 | AGATGTCTGACCAAATTTGACTAT |