Propagation of Rex regulog to Lactobacillus paracasei subsp. paracasei 8700:2
| Source regulog: | Rex - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Lactobacillus paracasei subsp. paracasei 8700:2 |
| Orthologous TF(s) | Lparp8_010100002935, Lparp8_010100010710 |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -39
Score: 4.6 Sequence: ATGTGAAAAGAGTAACAA
Locus tag: Lparp8_010100002935
|
||||
| Lparp8_010100002935 | -39 | 4.6 | ATGTGAAAAGAGTAACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rex2 | ||||
| Ortholog function: Redox-sensitive transcriptional regulator Rex paralog | ||||
| Lactobacillus casei ATCC 334 | LSEI_1250 | -39 | 4.6 | ATGTGAAAAGAGTAACAA |
| Lactobacillus rhamnosus GG | LGG_01260 | -39 | 4.8 | ATGTGAAAATGGTAACAA |
| Lactobacillus sakei subsp. sakei 23K | LSA0848 | -77 | 5.1 | ATATGAAAAAATTCACAA |
|
Position: -107
Score: 5 Sequence: TTAATAAATATTTCACAA
Position: -40
Score: 4.6 Sequence: TTGTGAAAACCTTATCAA
Locus tag: Lparp8_010100012119
|
||||
| Lparp8_010100012119 | -107 | 5 | TTAATAAATATTTCACAA | |
| -40 | 4.6 | TTGTGAAAACCTTATCAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: noxE | ||||
| Ortholog function: NADH oxidase (EC 1.6.99.3) | ||||
| Lactobacillus brevis ATCC 367 | LVIS_1558 | -44 | 5.4 | TTGTGAAAATTATCTCAA |
| Lactobacillus casei ATCC 334 | LSEI_0285 | -109 | 5 | TTAATAAATATTTCACAA |
| -40 | 5 | TTGTGAAAAGGTTATCAA | ||
| Lactobacillus rhamnosus GG | LGG_00325 | -41 | 5.3 | TTGTGAAATTTTTATCAA |
| Lactobacillus sakei subsp. sakei 23K | LSA0802 | -193 | 4.7 | TTTATAATAAAATCACAA |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_2067 | -114 | 4.6 | TCGTGTTAAATATCACAA |
|
Position: -106
Score: 5 Sequence: TCGTGAAAAAATTCACCA
Position: -49
Score: 5.4 Sequence: TTGTGAAATGGTTAACAA
Locus tag: Lparp8_010100014035
|
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| Lparp8_010100014035 | -106 | 5 | TCGTGAAAAAATTCACCA | |
| -49 | 5.4 | TTGTGAAATGGTTAACAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: adhE | ||||
| Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10) | ||||
| Lactobacillus acidophilus NCFM | LBA0461 | -45 | 5.5 | TTGTAAATTAGTTCACAA |
| Lactobacillus brevis ATCC 367 | LVIS_0119 | -105 | 5 | TTGTGATTTTTTTAACAT |
| -47 | 4.8 | TCGTGAAGAAGTTAACAA | ||
| Lactobacillus casei ATCC 334 | LSEI_0775 | -106 | 5 | TCGTGAAAAAATTCACCA |
| -85 | 4.7 | TTGTTTACAAAATCACAA | ||
| -49 | 5.4 | TTGTGAAATGGTTAACAA | ||
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | LBUL_1581 | -47 | 5.2 | TTGAGAAATTGATCACAA |
| Lactobacillus fermentum IFO 3956 | LAF_0277 | -151 | 4.9 | TTGAAATTTAATTCACAA |
| -85 | 4.5 | TTGTTGACTAAATCACAA | ||
| Lactobacillus johnsonii NCC 533 | LJ1766 | -289 | 4.8 | TTATTAAAATTTTAACAT |
| -191 | 5.3 | TTGTGAAATATTTTTCAA | ||
| -104 | 5 | TTGTAAAAAGATGCACAA | ||
| Lactobacillus plantarum WCFS1 | lp_3662 | -43 | 5.5 | TTGTAAATTAATTCACAA |
| Lactobacillus reuteri JCM 1112 | LAR_0310 | -238 | 4.4 | TTGTGAAATAGACTTCAA |
| -104 | 5.1 | TTGTTTAAATGTTCACAA | ||
| Lactobacillus rhamnosus GG | LGG_00757 | -105 | 5.2 | TCGTGAAAAAGTTCACTA |
| -84 | 4.7 | TTGTTTACAAAATCACAA | ||
| -48 | 5.4 | TTGTGAAATGGTTAACAA | ||
| Lactobacillus sakei subsp. sakei 23K | LSA0379 | -99 | 5.1 | CTGTTAAAAAAATCACAA |
| -42 | 5.2 | TTGTTAATTAAATCACAT | ||