Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of CggR regulog to Lactobacillus acidophilus NCFM

Reference regulog properties
Source regulog: CggR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: SorC
Regulation mode: repressor
Biological process: Glycolysis
Effector: Fructose-1,6-bisphosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus acidophilus NCFM
Orthologous TF(s) LBA0697
Regulated genes 1
Built upon 11 sites [see more]
Predicted regulatory interactions in Lactobacillus acidophilus NCFM
Locus tag Position Score Sequence
Position: 1
Score: 8
Sequence: TGGATTCGGACTTTTCTTTGCTCGAAGCGCTCGTTCC
Locus tag: LBA0697
LBA0697 1 8 TGGATTCGGACTTTTCTTTGCTCGAAGCGCTCGTTCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: cggR
Ortholog function: Transcriptional regulator of central glycolytic gene, SorC family
Lactobacillus acidophilus NCFM LBA0697 1 8 TGGATTCGGACTTTTCTTTGCTCGAAGCGCTCGTTCC
Lactobacillus brevis ATCC 367 LVIS_0660 1 6.5 TGCATGAGGATTGGCAATGGGTAGAGGCCATCATGCC
Lactobacillus casei ATCC 334 LSEI_0966 1 7.6 TGCATACTGAACTTGCGTGGCTCAAAGCGATCGCGCC
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_0566 1 6.9 TGAACACGGATTTATCCCTGCTCGAACTGCTTGTTCC
Lactobacillus helveticus DPC 4571 lhv_0742 1 7.9 TGAATTCGGACTTTTCTTTGCTCGAAGCGCTCGTTCC
Lactobacillus johnsonii NCC 533 LJ0871 1 6.1 TGGACTCGGATTTAACCTTGTTGCAAAGCTTAGTTCC
Lactobacillus plantarum WCFS1 lp_0788 1 6.7 TGCATTCAGATATTCAATGGATTGAGGCAATTGCCCC
Lactobacillus rhamnosus GG LGG_00932 1 7.6 TGCATACTGAACTTGCGTGGCTCAAAGCGATCGCGCC
Lactobacillus sakei subsp. sakei 23K LSA0603 1 6.5 TGCGCGATGAGTTATCTGCAATAGAAGCGGTTGCGCC
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1167 1 6.8 TGCGCGAGGAAGTAGAGTTGATTGAGTCAATCGTTCC
Pediococcus pentosaceus ATCC 25745 PEPE_0458 4 6 ATGATAATGAGATGGATTTATTAGAATCTGTTGTTCC