Propagation of HrcA regulog to Leuconostoc citreum KM20

Reference regulog properties
Source regulog:	HrcA - Lactobacillaceae
Regulator type:	Transcription factor
Regulator family:	HrcA
Regulation mode:	repressor
Biological process:	Heat shock response
Effector:	Heat shock
Phylum:	Firmicutes
Propagated regulon:
Target genome	Leuconostoc citreum KM20
Orthologous TF(s)	LCK_01093
Regulated genes	4

Built upon 69 sites [see more]

Predicted regulatory interactions in *Leuconostoc citreum KM20*
	Locus tag	Position	Score	Sequence
Position: -110 Score: 7.6 Sequence: TTAGCACTCTGATAAAAAGAGTGCTAA Position: -42 Score: 6.1 Sequence: TTAGCAGTAAGAAGTATTGAGTGCTAA Locus tag: LCK_01093
	LCK_01093	-110	7.6	TTAGCACTCTGATAAAAAGAGTGCTAA
		-42	6.1	TTAGCAGTAAGAAGTATTGAGTGCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hrcA
Ortholog function: Heat shock response transcriptional regulator HrcA, HrcA family
Lactobacillus acidophilus NCFM	LBA1249	-93	6.1	TTAGCACTCAGGTTGCATTATTGCTAA
		-45	6.1	TTAGCACCTGATAGATGTGAGTGCTAA
Lactobacillus brevis ATCC 367	LVIS_1331	-127	6.1	TTAGCACTTAATTACGTTGATTGCTAA
		-43	6.9	TTAGCACTTGTGTTGTTTGAGTGCTAA
Lactobacillus casei ATCC 334	LSEI_1567	-42	7.6	TTAGCACTCATATAAAACGAGTGCTAA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	LBUL_1229	-92	5.7	TTAGCATTCTCCTTGACTAACTGCTAA
Lactobacillus fermentum IFO 3956	LAF_0749	-33	6.4	TTAGCACTTAGATGGCCAGAGTGCTAA
Lactobacillus johnsonii NCC 533	LJ1481	-91	6.4	TTAGCACTCTACTTGAACAATTGCTAA
		-43	6.3	TTAGCACAGAAGAAAGAAGAGTGCTAA
Lactobacillus plantarum WCFS1	lp_2029	-191	7.1	TTAGCACTCGTAAGTAAGGAGTGCTAA
		-36	6.7	TTAGCACTCCATTAAGTTAAGTGCTAA
Lactobacillus reuteri JCM 1112	LAR_0677	-45	6.5	TTAGCACTTGACCCTAATGAGTGCTAA
Lactobacillus rhamnosus GG	LGG_01606	-42	7.6	TTAGCACTCGTGTAAAACGAGTGCTAA
Lactobacillus sakei subsp. sakei 23K	LSA1238	-41	7	TTAGCACTCGTAATAATCAAGTGCTAA
Lactobacillus salivarius subsp. salivarius UCC118	LSL_0576	-41	6.6	TTAGCACTCTAATGTGTTAAGTGCTAA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	LEUM_1349	-110	7.4	TTGGCACTCTTATAAAAAGAGTGCTAA
		-41	6.3	TTAGCAGTTAGATATAGTGAGTGCTAA
Pediococcus pentosaceus ATCC 25745	PEPE_0894	-41	6.4	TTAGCACTCCAACTTTCTAAGTGCTAA

Position: -84 Score: 7.6 Sequence: TTAGCACTCTAAAGAAAAGAGTGCTAA Locus tag: LCK_01277
	LCK_01277	-84	7.6	TTAGCACTCTAAAGAAAAGAGTGCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: clpL
Ortholog function: ATP-dependent Clp protease, ATP-binding subunit
Lactobacillus acidophilus NCFM	LBA0638	-70	6.8	TTAGCACTTGACTACCAAGAGTGCTAA
Lactobacillus brevis ATCC 367	LVIS_1554	-205	6.4	TTAGCATTCTATTGACGAGAGTGCTAG
Lactobacillus casei ATCC 334	LSEI_1762	-257	5.9	TTAGCACTCTTAGTGGCAGAGTGCTTG
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	LBUL_0510	-201	6.9	TTAGCACTTGACTAACTAGAGTGCTAA
Lactobacillus fermentum IFO 3956	LAF_1388	-190	5.6	TTAGCATTAGTTGCCAATCAGTGCTAA
Lactobacillus helveticus DPC 4571	lhv_0683	-71	6.7	TTAGCACTTGACTACTAAGAGTGCTAA
Lactobacillus johnsonii NCC 533	LJ0815	-70	7.6	TTAGCACTCATATATCAAGAGTGCTAA
Lactobacillus reuteri JCM 1112	LAR_1257	-211	6.9	TTAGCATTCATGGCTAAAGAGTGCTAA
Lactobacillus rhamnosus GG	LGG_01823	-128	6.2	TTAGCACTCTTGCGGTTAGAGTGCTTG
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	LEUM_0571	-151	7.6	TTAGCACTCTACTTTAAAGAGTGCTAA

Position: -53 Score: 7.7 Sequence: TTAGCACTCATTGTAAAAGAGTGCTAA Locus tag: LCK_01439
	LCK_01439	-53	7.7	TTAGCACTCATTGTAAAAGAGTGCTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: groS
Ortholog function: Heat shock protein 60 family co-chaperone GroES
Lactobacillus acidophilus NCFM	LBA0405	-159	7.6	TTAGCACTTTTTTATAAAGAGTGCTAA
		-84	6.8	TTAGCACTTAACTAAAAGGAGTGCTAA
Lactobacillus brevis ATCC 367	LVIS_0617	-62	6.4	TTAGCACTTATGTTAGTCAAGTGCTAA
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365	LBUL_1497	-140	6.5	TTAGCACTCTCGACTAAAAAGTGCTAT
		-65	6.7	TTAGCACTTGATCAAGATGAGTGCTAA
Lactobacillus fermentum IFO 3956	LAF_0325	-87	5.7	TTAGCACTTGAGGGGGTTGAGTGCTAG
Lactobacillus helveticus DPC 4571	lhv_0425	-159	6.9	TTAGCACTATTTGTAAAAAAGTGCTAA
		-85	7.1	TTAGCACTTAAGAAATAAGAGTGCTAA
Lactobacillus plantarum WCFS1	lp_0727	-51	6.4	TTAGCACTTGAGGTTGAGGAGTGCTAA
Lactobacillus reuteri JCM 1112	LAR_0342	-61	6.5	TTAGCACTTGAAGAGTTTGAGTGCTAA
Lactobacillus sakei subsp. sakei 23K	LSA0358	-55	6.8	TTAGCACTTGAGTGTTTAGAGTGCTAA
Lactobacillus salivarius subsp. salivarius UCC118	LSL_1212	-135	6.4	TTAGCACTCTAATGTGTCGAGTGATAA
		-61	7	TTAGCACTCAAGAGTTGAGAGTGCTAA
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293	LEUM_1763	-54	7.5	TTAGCACTCACGTTTAAAGAGTGCTAA
Pediococcus pentosaceus ATCC 25745	PEPE_0420	-65	6.3	TTAGCACTTAGAGATGACGAGTGCTAA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of HrcA regulog to Leuconostoc citreum KM20

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --