Propagation of HrcA regulog to Leuconostoc citreum KM20
| Source regulog: | HrcA - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | HrcA |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Leuconostoc citreum KM20 |
| Orthologous TF(s) | LCK_01093 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -110
Score: 7.6 Sequence: TTAGCACTCTGATAAAAAGAGTGCTAA
Position: -42
Score: 6.1 Sequence: TTAGCAGTAAGAAGTATTGAGTGCTAA
Locus tag: LCK_01093
|
||||
| LCK_01093 | -110 | 7.6 | TTAGCACTCTGATAAAAAGAGTGCTAA | |
| -42 | 6.1 | TTAGCAGTAAGAAGTATTGAGTGCTAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hrcA | ||||
| Ortholog function: Heat shock response transcriptional regulator HrcA, HrcA family | ||||
| Lactobacillus acidophilus NCFM | LBA1249 | -93 | 6.1 | TTAGCACTCAGGTTGCATTATTGCTAA |
| -45 | 6.1 | TTAGCACCTGATAGATGTGAGTGCTAA | ||
| Lactobacillus brevis ATCC 367 | LVIS_1331 | -127 | 6.1 | TTAGCACTTAATTACGTTGATTGCTAA |
| -43 | 6.9 | TTAGCACTTGTGTTGTTTGAGTGCTAA | ||
| Lactobacillus casei ATCC 334 | LSEI_1567 | -42 | 7.6 | TTAGCACTCATATAAAACGAGTGCTAA |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | LBUL_1229 | -92 | 5.7 | TTAGCATTCTCCTTGACTAACTGCTAA |
| Lactobacillus fermentum IFO 3956 | LAF_0749 | -33 | 6.4 | TTAGCACTTAGATGGCCAGAGTGCTAA |
| Lactobacillus johnsonii NCC 533 | LJ1481 | -91 | 6.4 | TTAGCACTCTACTTGAACAATTGCTAA |
| -43 | 6.3 | TTAGCACAGAAGAAAGAAGAGTGCTAA | ||
| Lactobacillus plantarum WCFS1 | lp_2029 | -191 | 7.1 | TTAGCACTCGTAAGTAAGGAGTGCTAA |
| -36 | 6.7 | TTAGCACTCCATTAAGTTAAGTGCTAA | ||
| Lactobacillus reuteri JCM 1112 | LAR_0677 | -45 | 6.5 | TTAGCACTTGACCCTAATGAGTGCTAA |
| Lactobacillus rhamnosus GG | LGG_01606 | -42 | 7.6 | TTAGCACTCGTGTAAAACGAGTGCTAA |
| Lactobacillus sakei subsp. sakei 23K | LSA1238 | -41 | 7 | TTAGCACTCGTAATAATCAAGTGCTAA |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0576 | -41 | 6.6 | TTAGCACTCTAATGTGTTAAGTGCTAA |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_1349 | -110 | 7.4 | TTGGCACTCTTATAAAAAGAGTGCTAA |
| -41 | 6.3 | TTAGCAGTTAGATATAGTGAGTGCTAA | ||
| Pediococcus pentosaceus ATCC 25745 | PEPE_0894 | -41 | 6.4 | TTAGCACTCCAACTTTCTAAGTGCTAA |
|
Position: -84
Score: 7.6 Sequence: TTAGCACTCTAAAGAAAAGAGTGCTAA
Locus tag: LCK_01277
|
||||
| LCK_01277 | -84 | 7.6 | TTAGCACTCTAAAGAAAAGAGTGCTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: clpL | ||||
| Ortholog function: ATP-dependent Clp protease, ATP-binding subunit | ||||
| Lactobacillus acidophilus NCFM | LBA0638 | -70 | 6.8 | TTAGCACTTGACTACCAAGAGTGCTAA |
| Lactobacillus brevis ATCC 367 | LVIS_1554 | -205 | 6.4 | TTAGCATTCTATTGACGAGAGTGCTAG |
| Lactobacillus casei ATCC 334 | LSEI_1762 | -257 | 5.9 | TTAGCACTCTTAGTGGCAGAGTGCTTG |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | LBUL_0510 | -201 | 6.9 | TTAGCACTTGACTAACTAGAGTGCTAA |
| Lactobacillus fermentum IFO 3956 | LAF_1388 | -190 | 5.6 | TTAGCATTAGTTGCCAATCAGTGCTAA |
| Lactobacillus helveticus DPC 4571 | lhv_0683 | -71 | 6.7 | TTAGCACTTGACTACTAAGAGTGCTAA |
| Lactobacillus johnsonii NCC 533 | LJ0815 | -70 | 7.6 | TTAGCACTCATATATCAAGAGTGCTAA |
| Lactobacillus reuteri JCM 1112 | LAR_1257 | -211 | 6.9 | TTAGCATTCATGGCTAAAGAGTGCTAA |
| Lactobacillus rhamnosus GG | LGG_01823 | -128 | 6.2 | TTAGCACTCTTGCGGTTAGAGTGCTTG |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0571 | -151 | 7.6 | TTAGCACTCTACTTTAAAGAGTGCTAA |
|
Position: -53
Score: 7.7 Sequence: TTAGCACTCATTGTAAAAGAGTGCTAA
Locus tag: LCK_01439
|
||||
| LCK_01439 | -53 | 7.7 | TTAGCACTCATTGTAAAAGAGTGCTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: groS | ||||
| Ortholog function: Heat shock protein 60 family co-chaperone GroES | ||||
| Lactobacillus acidophilus NCFM | LBA0405 | -159 | 7.6 | TTAGCACTTTTTTATAAAGAGTGCTAA |
| -84 | 6.8 | TTAGCACTTAACTAAAAGGAGTGCTAA | ||
| Lactobacillus brevis ATCC 367 | LVIS_0617 | -62 | 6.4 | TTAGCACTTATGTTAGTCAAGTGCTAA |
| Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 | LBUL_1497 | -140 | 6.5 | TTAGCACTCTCGACTAAAAAGTGCTAT |
| -65 | 6.7 | TTAGCACTTGATCAAGATGAGTGCTAA | ||
| Lactobacillus fermentum IFO 3956 | LAF_0325 | -87 | 5.7 | TTAGCACTTGAGGGGGTTGAGTGCTAG |
| Lactobacillus helveticus DPC 4571 | lhv_0425 | -159 | 6.9 | TTAGCACTATTTGTAAAAAAGTGCTAA |
| -85 | 7.1 | TTAGCACTTAAGAAATAAGAGTGCTAA | ||
| Lactobacillus plantarum WCFS1 | lp_0727 | -51 | 6.4 | TTAGCACTTGAGGTTGAGGAGTGCTAA |
| Lactobacillus reuteri JCM 1112 | LAR_0342 | -61 | 6.5 | TTAGCACTTGAAGAGTTTGAGTGCTAA |
| Lactobacillus sakei subsp. sakei 23K | LSA0358 | -55 | 6.8 | TTAGCACTTGAGTGTTTAGAGTGCTAA |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_1212 | -135 | 6.4 | TTAGCACTCTAATGTGTCGAGTGATAA |
| -61 | 7 | TTAGCACTCAAGAGTTGAGAGTGCTAA | ||
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_1763 | -54 | 7.5 | TTAGCACTCACGTTTAAAGAGTGCTAA |
| Pediococcus pentosaceus ATCC 25745 | PEPE_0420 | -65 | 6.3 | TTAGCACTTAGAGATGACGAGTGCTAA |