Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of AgaR2 regulog to Lactobacillus acidophilus NCFM

Reference regulog properties
Source regulog: AgaR2 - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: N-acetylgalactosamine utilization
Effector: N-acetylgalactosamine
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus acidophilus NCFM
Orthologous TF(s) No orthologous TFs found
Regulated genes 1
Built upon 6 sites [see more]
Predicted regulatory interactions in Lactobacillus acidophilus NCFM
Locus tag Position Score Sequence
Position: -79
Score: 4.7
Sequence: AACTGGTATTGACCAATT
Locus tag: LBA0144
LBA0144 -79 4.7 AACTGGTATTGACCAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: agaA
Ortholog function: N-acetylgalactosamine-6-phosphate deacetylase (EC 3.5.1.25)
Lactobacillus helveticus DPC 4571 lhv_0514 -85 6 AACTGGTTATAACCACTT
-31 6 AAGTGGTACTAACCAGTT
Lactobacillus johnsonii NCC 533 LJ0118 -40 5.8 AGGTGGTACTAACCAGTT
Lactobacillus rhamnosus GG LGG_00334 -30 4.5 ATGTGGTTGGTACCACGT
Pediococcus pentosaceus ATCC 25745 PEPE_1754 -117 5.6 AACTGGTACCAACCAGTT