Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of FabT regulog to Lactobacillus rhamnosus HN001

Reference regulog properties
Source regulog: FabT - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: MarR
Regulation mode: repressor
Biological process: Fatty acid biosynthesis
Effector: Long-chain acyl-ACP
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus rhamnosus HN001
Orthologous TF(s) LRH_13464
Regulated genes 2
Built upon 12 sites [see more]
Predicted regulatory interactions in Lactobacillus rhamnosus HN001
Locus tag Position Score Sequence
Position: -141
Score: 5.4
Sequence: GCTTTGAACATCCAATT
Locus tag: LRH_13459
LRH_13459 -141 5.4 GCTTTGAACATCCAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fabA
Ortholog function: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-)
Lactobacillus brevis ATCC 367 LVIS_0937 -206 5.3 GGTTTGATATTCAAATT
-55 6 AGTTTGAACATCAAATT
Lactobacillus helveticus DPC 4571 lhv_1933 -153 5.1 AGTTTGATATTCAAACT
Lactobacillus reuteri JCM 1112 LAR_0929 -59 5.6 AATTTGATCATCGAATA
Lactobacillus rhamnosus GG LGG_02122 -141 5.4 GCTTTGAACATCCAATT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0307 27 5.5 ATTTTGACTATCAGATA
Oenococcus oeni PSU-1 OEOE_1595 -294 5.5 ATTTTGATCCTTAAATC
Position: -39
Score: 5.9
Sequence: ACTTTGAGTATCAAATC
Locus tag: LRH_13464
LRH_13464 -39 5.9 ACTTTGAGTATCAAATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fabT
Ortholog function: Fatty acid biosynthesis transcriptional regulator FabT, MarR family
Lactobacillus brevis ATCC 367 LVIS_0936 -206 5.3 GGTTTGATATTCAAATT
-55 6 AGTTTGAACATCAAATT
Lactobacillus casei ATCC 334 LSEI_2120 -39 6 ACTTTGAATATCAAATC
Lactobacillus fermentum IFO 3956 LAF_0309 -54 6 ATTTTGATATTCAAATT
Lactobacillus rhamnosus GG LGG_02121 -39 5.9 ACTTTGAGTATCAAATC
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0450 -49 6.3 ATTTTGATAATCAAATT
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 LEUM_0308 27 5.5 ATTTTGACTATCAGATA
Oenococcus oeni PSU-1 OEOE_1594 -294 5.5 ATTTTGATCCTTAAATC
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