Propagation of FabT regulog to Lactobacillus rhamnosus HN001
| Source regulog: | FabT - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | MarR |
| Regulation mode: | repressor |
| Biological process: | Fatty acid biosynthesis |
| Effector: | Long-chain acyl-ACP |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Lactobacillus rhamnosus HN001 |
| Orthologous TF(s) | LRH_13464 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -141
Score: 5.4 Sequence: GCTTTGAACATCCAATT
Locus tag: LRH_13459
|
||||
| LRH_13459 | -141 | 5.4 | GCTTTGAACATCCAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fabA | ||||
| Ortholog function: (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase (EC 4.2.1.-) | ||||
| Lactobacillus brevis ATCC 367 | LVIS_0937 | -206 | 5.3 | GGTTTGATATTCAAATT |
| -55 | 6 | AGTTTGAACATCAAATT | ||
| Lactobacillus helveticus DPC 4571 | lhv_1933 | -153 | 5.1 | AGTTTGATATTCAAACT |
| Lactobacillus reuteri JCM 1112 | LAR_0929 | -59 | 5.6 | AATTTGATCATCGAATA |
| Lactobacillus rhamnosus GG | LGG_02122 | -141 | 5.4 | GCTTTGAACATCCAATT |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0307 | 27 | 5.5 | ATTTTGACTATCAGATA |
| Oenococcus oeni PSU-1 | OEOE_1595 | -294 | 5.5 | ATTTTGATCCTTAAATC |
|
Position: -39
Score: 5.9 Sequence: ACTTTGAGTATCAAATC
Locus tag: LRH_13464
|
||||
| LRH_13464 | -39 | 5.9 | ACTTTGAGTATCAAATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fabT | ||||
| Ortholog function: Fatty acid biosynthesis transcriptional regulator FabT, MarR family | ||||
| Lactobacillus brevis ATCC 367 | LVIS_0936 | -206 | 5.3 | GGTTTGATATTCAAATT |
| -55 | 6 | AGTTTGAACATCAAATT | ||
| Lactobacillus casei ATCC 334 | LSEI_2120 | -39 | 6 | ACTTTGAATATCAAATC |
| Lactobacillus fermentum IFO 3956 | LAF_0309 | -54 | 6 | ATTTTGATATTCAAATT |
| Lactobacillus rhamnosus GG | LGG_02121 | -39 | 5.9 | ACTTTGAGTATCAAATC |
| Lactobacillus salivarius subsp. salivarius UCC118 | LSL_0450 | -49 | 6.3 | ATTTTGATAATCAAATT |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0308 | 27 | 5.5 | ATTTTGACTATCAGATA |
| Oenococcus oeni PSU-1 | OEOE_1594 | -294 | 5.5 | ATTTTGATCCTTAAATC |