Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CopR regulog to Lactobacillus helveticus DPC 4571

Reference regulog properties
Source regulog: CopR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: CopY
Regulation mode: repressor
Biological process: Copper homeostasis
Effector: Copper ion, (Cu2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus helveticus DPC 4571
Orthologous TF(s) lhv_2094
Regulated genes 2
Built upon 34 sites [see more]
Predicted regulatory interactions in Lactobacillus helveticus DPC 4571
Locus tag Position Score Sequence
Position: -177
Score: 5.4
Sequence: GTGACTACAGTTGTAAACTA
Locus tag: lhv_1944
lhv_1944 -177 5.4 GTGACTACAGTTGTAAACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: copB
Ortholog function: Copper-translocating P-type ATPase (EC 3.6.3.4)
Lactobacillus casei ATCC 334 LSEI_A01 -77 5.4 GTGACTACAGTTGTAAACTA
-46 4.6 GAGACTACAAACGTAAACTT
Lactobacillus helveticus DPC 4571 lhv_1944 -177 5.4 GTGACTACAGTTGTAAACTA
-146 5.1 GAGACTACAAATGTAAACTT
Position: -32
Score: 6.3
Sequence: ATATTTACAAATGTAAACTA
Locus tag: lhv_2094
lhv_2094 -32 6.3 ATATTTACAAATGTAAACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: copR
Ortholog function: Copper transport transcriptional regulator CopR, CopY family
Lactobacillus acidophilus NCFM LBA1963 -32 6.1 ATAGTTACATTTGTAAACGA
Lactobacillus helveticus DPC 4571 lhv_2094 -59 5.3 AAGTTTACAAATGTAAAATT
-32 6.3 ATATTTACAAATGTAAACTA