Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of AraR regulog to Lactobacillus plantarum JDM1

Reference regulog properties
Source regulog: AraR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus plantarum JDM1
Orthologous TF(s) JDM1_2843
Regulated genes 2
Built upon 18 sites [see more]
Predicted regulatory interactions in Lactobacillus plantarum JDM1
Locus tag Position Score Sequence
Position: -234
Score: 5.4
Sequence: TTATTGATGCGGATAAATCG
Locus tag: JDM1_2843
JDM1_2843 -234 5.4 TTATTGATGCGGATAAATCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: araR
Ortholog function: Arabinoside utilization transcriptional repressor AraR, GntR family
Lactobacillus fermentum IFO 3956 LAF_1556 -77 5.9 TGATTTATACGGACAAAAAA
Lactobacillus plantarum WCFS1 lp_3558 -234 5.2 TTATTGATGCGGATAAATTG