Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NrdR regulog to Lactobacillus rhamnosus Lc 705

Reference regulog properties
Source regulog: NrdR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Firmicutes
Propagated regulon:
Target genome Lactobacillus rhamnosus Lc 705
Orthologous TF(s) LC705_01737
Regulated genes 5
Built upon 81 sites [see more]
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

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© 2009-2020 RegPrecise
Predicted regulatory interactions in Lactobacillus rhamnosus Lc 705
Locus tag Position Score Sequence
Position: -131
Score: 5.5
Sequence: CCACTATATAGTGTAT
Locus tag: LC705_00140
LC705_00140 -131 5.5 CCACTATATAGTGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrdD
Ortholog function: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Lactobacillus acidophilus NCFM LBA0160 -58 4.5 ATACAAGATGTTGTGC
Lactobacillus casei ATCC 334 LSEI_0131 -133 5 ACACACTATATAGTGT
-131 5.5 ACACTATATAGTGTAT
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_0185 -173 5.3 CCACAATATCTGGTAT
-131 4.6 AAACAAGATGTAGTGG
Lactobacillus fermentum IFO 3956 LAF_1376 -99 4.7 CCACAAGATCTTGTAA
-68 5.3 AAACTATATGTTGTGT
Lactobacillus helveticus DPC 4571 lhv_0169 -56 5.1 ATACAAGATGTTGTAT
Lactobacillus johnsonii NCC 533 LJ0137 -63 4.6 CTACAATATCATGTAG
Lactobacillus plantarum WCFS1 lp_2932 -80 5.5 CTACTATATATAGTAT
-49 4.4 GCACTATCAATTGTAT
Lactobacillus reuteri JCM 1112 LAR_1249 -92 5.3 CCACAACATATAGTGT
Lactobacillus rhamnosus GG LGG_00138 -131 5.5 CCACTATATAGTGTAT
Lactobacillus sakei subsp. sakei 23K LSA1459 -75 5.1 ACACTATATATAGTTG
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1332 -108 5.5 ATACTATATATAGTGT
-76 5.9 ACACTATATATTGTAT
Pediococcus pentosaceus ATCC 25745 PEPE_0484 -133 5.7 ATACTATATATTGTAT
Position: -85
Score: 4.6
Sequence: CCCCAAGATATGGTGT
Locus tag: LC705_01490
LC705_01490 -85 4.6 CCCCAAGATATGGTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrdH
Ortholog function: Glutaredoxin-like protein NrdH
Lactobacillus brevis ATCC 367 LVIS_0597 -126 4.5 ACACCATATTTGGTAG
-94 4.6 CTACCAAATATGGTGT
Lactobacillus casei ATCC 334 LSEI_1467 -85 4.6 CCCCAAGATATGGTAT
Lactobacillus rhamnosus GG LGG_01473 -85 4.6 CCCCAAGATATGGTGT
Lactobacillus sakei subsp. sakei 23K LSA0942 -89 5 CTACCATATCTGGTAT
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1230 -84 5.5 CCACAATATATGGTGT
-51 4.9 TCTCTATATATTGTAT
Position: -145
Score: 5
Sequence: ATACTACATCTTGTGG
Locus tag: LC705_01782
LC705_01782 -145 5 ATACTACATCTTGTGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrdG
Ortholog function: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Lactobacillus acidophilus NCFM LBA0161 -58 4.5 ATACAAGATGTTGTGC
Lactobacillus casei ATCC 334 LSEI_1742 -113 4.3 ATACTACATCTTGGGG
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 LBUL_0186 -173 5.3 CCACAATATCTGGTAT
-131 4.6 AAACAAGATGTAGTGG
Lactobacillus fermentum IFO 3956 LAF_1375 -99 4.7 CCACAAGATCTTGTAA
-68 5.3 AAACTATATGTTGTGT
Lactobacillus helveticus DPC 4571 lhv_0170 -56 5.1 ATACAAGATGTTGTAT
Lactobacillus johnsonii NCC 533 LJ0138 -63 4.6 CTACAATATCATGTAG
Lactobacillus plantarum WCFS1 lp_2931 -80 5.5 CTACTATATATAGTAT
-49 4.4 GCACTATCAATTGTAT
Lactobacillus reuteri JCM 1112 LAR_1248 -92 5.3 CCACAACATATAGTGT
Lactobacillus rhamnosus GG LGG_01800 -145 5 ATACTACATCTTGTAG
Lactobacillus sakei subsp. sakei 23K LSA1458 -75 5.1 ACACTATATATAGTTG
Lactobacillus salivarius subsp. salivarius UCC118 LSL_1331 -108 5.5 ATACTATATATAGTGT
-76 5.9 ACACTATATATTGTAT
Pediococcus pentosaceus ATCC 25745 PEPE_0485 -133 5.7 ATACTATATATTGTAT
Position: -31
Score: 5.3
Sequence: ATACCATATCTTGTAT
Locus tag: LC705_02286
LC705_02286 -31 5.3 ATACCATATCTTGTAT
Supported by regulated orthologs from reference regulons