Propagation of GntR1 regulog to Oenococcus oeni PSU-1
| Source regulog: | GntR1 - Lactobacillaceae |
| Regulator type: | Transcription factor |
| Regulator family: | RpiR |
| Regulation mode: | |
| Biological process: | Gluconate utilization |
| Effector: | Gluconate |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Oenococcus oeni PSU-1 |
| Orthologous TF(s) | OEOE_0636, OEOE_1524 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -78
Score: 5.6 Sequence: TATGTAAATATTTTACACG
Position: -46
Score: 5.4 Sequence: TGAGTAAAAAAATTACATA
Locus tag: OEOE_1523
|
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| OEOE_1523 | -78 | 5.6 | TATGTAAATATTTTACACG | |
| -46 | 5.4 | TGAGTAAAAAAATTACATA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gntZ | ||||
| Ortholog function: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) | ||||
| Lactobacillus brevis ATCC 367 | LVIS_0144 | -106 | 4.8 | TTTGTAATTTTTTTACGGT |
| -75 | 6.3 | TATGTAAATTTTTTTCATA | ||
| Lactobacillus casei ATCC 334 | LSEI_0227 | -146 | 4.7 | CGTGAAAATAATTTACGGT |
| -113 | 5.7 | TTTGTAAACGATTTACATA | ||
| Lactobacillus plantarum WCFS1 | lp_1251 | -109 | 6 | AATGAAAATAATTTACAAA |
| -77 | 5.1 | TATGTAAATAGTTTTATTA | ||
| Lactobacillus rhamnosus GG | LGG_00274 | -238 | 5.4 | ATTGAAAATTATTTACGAA |
| -205 | 5.8 | TTTGTAATTATTTTACATA | ||
| Lactobacillus sakei subsp. sakei 23K | LSA0297 | -96 | 5.2 | TACGAAAATAATTTTCTAT |
| Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 | LEUM_0551 | -97 | 5.1 | TTAGAAAACAATTTTCAAT |
| -65 | 6.1 | TGTGTAAATTATTTTCATA | ||
| Oenococcus oeni PSU-1 | OEOE_1523 | -78 | 5.6 | TATGTAAATATTTTACACG |
| -46 | 5.4 | TGAGTAAAAAAATTACATA | ||
| Pediococcus pentosaceus ATCC 25745 | PEPE_1362 | -98 | 5.3 | TAAGAAAATAATTTTCTTG |
| -66 | 5.8 | TATGTAACATATTTTCATA | ||
|
Position: -32
Score: 5.6 Sequence: CGTGTAAAATATTTACATA
Locus tag: OEOE_1524
|
||||
| OEOE_1524 | -32 | 5.6 | CGTGTAAAATATTTACATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gntR1 | ||||
| Ortholog function: Gluconate utilization transcriptional regulator GntR1, RpiR family | ||||
| Oenococcus oeni PSU-1 | OEOE_1524 | -64 | 5.4 | TATGTAATTTTTTTACTCA |
| -32 | 5.6 | CGTGTAAAATATTTACATA | ||