Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of CtsR regulog to Oenococcus oeni ATCC BAA-1163

Reference regulog properties
Source regulog: CtsR - Lactobacillaceae
Regulator type: Transcription factor
Regulator family: CtsR
Regulation mode: repressor
Biological process: Heat shock response
Effector: Heat shock
Phylum: Firmicutes
Propagated regulon:
Target genome Oenococcus oeni ATCC BAA-1163
Orthologous TF(s) OENOO_55015
Regulated genes 4
Built upon 44 sites [see more]
Predicted regulatory interactions in Oenococcus oeni ATCC BAA-1163
Locus tag Position Score Sequence
Position: -73
Score: 6
Sequence: GAATCTCTGACCATTATTGACTAT
Locus tag: OENOO_38013
OENOO_38013 -73 6 GAATCTCTGACCATTATTGACTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: clpE
Ortholog function: ATP-dependent Clp protease, ATP-binding subunit ClpE
Lactobacillus brevis ATCC 367 LVIS_1554 -84 0.6 ATGGTCAAGAAAGGTCAAGCCTTT
Lactobacillus casei ATCC 334 LSEI_1762 -198 0.1 TAGGTCAAGAAAGGTCAAACCTTT
Lactobacillus fermentum IFO 3956 LAF_1388 -48 -0.7 ATGGTCAAGAAAAGTCAAAGGTTG
Lactobacillus plantarum WCFS1 lp_1269 -93 -2.3 AAGGTCAACAAAGGTCAAAGAGCC
Lactobacillus reuteri JCM 1112 LAR_1257 -59 0.2 ATGGTCAAGAAAGGTCAAAACATT
Lactobacillus rhamnosus GG LGG_01823 -69 0.1 TAGGTCAAGAAAGGTCAAACCTTT
Lactobacillus sakei subsp. sakei 23K LSA1465 -66 -1.8 AAGGTCAAAGATAGTCAAACAAAC
Lactobacillus salivarius subsp. salivarius UCC118 LSL_0386 -57 -1.6 AAGGTCAAAGTTGGTCAAAATAAC
Oenococcus oeni PSU-1 OEOE_0640 -27 -1.3 AAGGTCAATAAAGGTCAAACATTG
Pediococcus pentosaceus ATCC 25745 PEPE_0607 -223 -1.5 ATGGTCAATATTGGTCAAACATCA
Position: -71
Score: 6.5
Sequence: AAATGTTTGACCAATCTTGACTAT
Locus tag: OENOO_49011
OENOO_49011 -71 6.5 AAATGTTTGACCAATCTTGACTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: grpE
Ortholog function: Heat shock protein GrpE
Lactobacillus fermentum IFO 3956 LAF_0750 -89 6.4 AGATCTTTGACTTTTGTTGACTTT
Lactobacillus plantarum WCFS1 lp_2028 -91 5.9 AATACTTTGTCTTTCCTTGACTTT
Lactobacillus reuteri JCM 1112 LAR_0678 -101 6.5 AATTGTTTGACGTTTCTTGACTTT
Lactobacillus sakei subsp. sakei 23K LSA1237 -87 5.3 CAATTCTTGACTTTATTTGACGTT
Oenococcus oeni PSU-1 OEOE_1310 -71 6.5 AAATGTTTGACCAATCTTGACTAT
Pediococcus pentosaceus ATCC 25745 PEPE_0895 -107 6 AGATGTCTGACCAAATTTGACTAT
Position: 6
Score: 6.7
Sequence: AAAAGTTTGACCTTTTTTGACCAA
Locus tag: OENOO_50022
OENOO_50022 6 6.7 AAAAGTTTGACCTTTTTTGACCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: groS
Ortholog function: Heat shock protein 60 family co-chaperone GroES
Lactobacillus fermentum IFO 3956 LAF_0325 -153 -0.6 TTGGTCAAAATTAGTCAAAGTTTT
Lactobacillus reuteri JCM 1112 LAR_0342 -128 -1.1 ATGGTCAAAAAAAGTCAAAGTGTT
Oenococcus oeni PSU-1 OEOE_1397 -72 6.7 AAAAGTTTGACCTTTTTTGACCAA
Pediococcus pentosaceus ATCC 25745 PEPE_0420 -128 -0.9 TTGGTTAATAAAGGTCAAAAATAC
Position: -96
Score: 6.5
Sequence: TTTTATTTGACCTTTCTTGACTTT
Locus tag: OENOO_66120
OENOO_66120 -96 6.5 TTTTATTTGACCTTTCTTGACTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hsp
Ortholog function: Small heat shock protein
Oenococcus oeni PSU-1 OEOE_0289 -96 6.5 TTTTATTTGACCTTTCTTGACTTT
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